Evidence map›Paper›PMID 41969612›Full record

ArticleHuman mutation2026

Development of a Multiplex Amplification System Using Oxford Nanopore Sequencing for STRs and InDels.

Wei Han, Qingzhen Zhang, Xiaochang Zhang, Mingjie Feng, Hao Xu, Xiaoen Geng, Yixin Wang, Zhe Zhou

Abstract read
In one paragraph

Article in Human mutation, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Wei HanLaboratory of Biotechnology, Bioinformatics Center of AMMS, Beijing, China.ORCID https://orcid.org/0009-0008-9168-7771
Qingzhen ZhangLaboratory of Biotechnology, Bioinformatics Center of AMMS, Beijing, China.ORCID https://orcid.org/0000-0002-5750-6833
Xiaochang ZhangLaboratory of Biotechnology, Bioinformatics Center of AMMS, Beijing, China.
Mingjie FengLaboratory of Biotechnology, Bioinformatics Center of AMMS, Beijing, China.
Hao XuLaboratory of Biotechnology, Bioinformatics Center of AMMS, Beijing, China.
Xiaoen GengLaboratory of Biotechnology, Bioinformatics Center of AMMS, Beijing, China.
Yixin WangLaboratory of Biotechnology, Bioinformatics Center of AMMS, Beijing, China.
Zhe ZhouLaboratory of Biotechnology, Bioinformatics Center of AMMS, Beijing, China.ORCID https://orcid.org/0000-0003-4616-0467

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nanopore sequencing has emerged as a promising technology due to its real-time data acquisition, portability, and high throughput. However, the genotyping capabilities of the latest flow cell, R10.4.1, for short tandem repeats (STRs) remain insufficiently validated, and its accuracy in typing insertions or deletions (InDels) in earlier versions has been rarely investigated. To bridge these gaps, we developed the NanoID panel, a multiplex amplification system incorporating 29 autosomal STRs, 29 Y-chromosome STRs, 61 autosomal InDels, 2 Y-chromosome InDels, and amelogenin. We conducted genotyping on 112 unrelated individual samples and screened 114 loci with 100% accuracy. Subsequently, we evaluated these 114 loci for reproducibility, sensitivity, kinship inference, and species specificity. All loci were consistently and accurately genotyped across triplicate experiments. NanoID achieved an accuracy rate exceeding 99.12% (based on the 2-out-of-3 rule) when the DNA input was ≥ 50 pg. The combined power of discrimination and the cumulative probability of exclusion were 1 - 7.990 × 10

Indexed as

INDEL MutationMicrosatellite RepeatsMultiplex Polymerase Chain ReactionNanopore SequencingChromosomes, Human, YGenotypeGenotyping TechniquesHigh-Throughput Nucleotide SequencingHumansReproducibility of ResultsSequence Analysis, DNAforensic DNA analysisInDelskinship testingnanopore sequencingSTRs

Identifiers

PMID41969612
PMCPMC13062922

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.