Evidence map›Paper›PMID 41965374›Full record

ArticleNature communications2026

An information content principle explains regulatory patterns of gene expression across human tissues.

Ruthie Golomb, Maayan Yoles, Simon Fishilevich, Bar Cohen, Sapir Savariego Peled, Dvir Dahary, David Gokhman, Yitzhak Pilpel

Abstract read
In one paragraph

Article in Nature communications, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Ruthie GolombDepartment of Molecular Genetics, Weizmann Institute of Science, Rehovot, Israel.ORCID http://orcid.org/0009-0007-3280-8003
Maayan Yoles *Department of Molecular Genetics, Weizmann Institute of Science, Rehovot, Israel.
Simon Fishilevich *Department of Molecular Genetics, Weizmann Institute of Science, Rehovot, Israel.
Bar CohenDepartment of Molecular Genetics, Weizmann Institute of Science, Rehovot, Israel.
Sapir Savariego PeledDepartment of Molecular Cell Biology, Weizmann Institute of Science, Rehovot, Israel.
Dvir DaharyDepartment of Molecular Genetics, Weizmann Institute of Science, Rehovot, Israel.
David GokhmanDepartment of Molecular Genetics, Weizmann Institute of Science, Rehovot, Israel.ORCID http://orcid.org/0000-0002-3536-9006
Yitzhak PilpelDepartment of Molecular Genetics, Weizmann Institute of Science, Rehovot, Israel. pilpel@weizmann.ac.il.ORCID http://orcid.org/0000-0003-3200-9344

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Gene expression ranges from broadly expressed to tissue-specific patterns, with many genes displaying intermediate specificity. Understanding how regulatory architecture scales with tissue specificity can reveal fundamental principles of genome regulation. By analyzing cis-regulatory element counts across human genes with varying tissue specificity, we identify a non-monotonic pattern: genes with intermediate specificity harbor the most regulatory elements, suggesting distinct regulatory strategies across the expression spectrum. We apply the Minimum Description Length principle from information theory, and maximum parsimony from phylogenetics, to quantify regulatory demand underlying expression patterns. This measure scales consistently with cis-regulatory element counts, transcription factors, microRNAs, and gene structure, and distinguishes switch-like regulation in selectively expressed genes from fine-tuning regulation in broadly expressed genes. Regulatory element abundance peaks in genes of intermediate evolutionary age. Regulatory architecture appears to scale with informational costs, suggesting that the genome operates as a decompression device, where regulation is dictated by minimally required complexity.

Indexed as

Gene Expression RegulationEvolution, MolecularGenome, HumanHumansMicroRNAsOrgan SpecificityPhylogenyRegulatory Elements, TranscriptionalRegulatory Sequences, Nucleic AcidTranscription FactorsMicroRNAsTranscription Factors

Identifiers

PMID41965374
PMCPMC13243617

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.