Evidence map›Paper›PMID 41959308›Full record

ArticlebioRxiv : the preprint server for biology2026

Species-specific prophage induction by ciprofloxacin in human gut metagenomes.

Ben Sakdinan, Anshul Sinha, Firdausi Qadri, Ashraful I Khan, Eric J Nelson, B Jesse Shapiro

Abstract readPreprint
PubMed Full text at PMC Publisher
In one paragraph

Article in bioRxiv : the preprint server for biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors.

Ben SakdinanDepartment of Microbiology & Immunology, McGill University, Montréal, QC, Canada.
Anshul SinhaMcGill Centre for Microbiome Research, Montréal, QC, Canada.ORCID 0000-0003-2578-5273
Firdausi QadriInfectious Diseases Division, International Centre for Diarrheal Disease Research, Bangladesh, Dhaka, Bangladesh.ORCID 0000-0002-8928-9888
Ashraful I KhanInfectious Diseases Division, International Centre for Diarrheal Disease Research, Bangladesh, Dhaka, Bangladesh.ORCID 0000-0003-3751-1974
Eric J NelsonEmerging Pathogens Institute, University of Florida, Gainesville, FL, USA.
B Jesse ShapiroDepartment of Microbiology & Immunology, McGill University, Montréal, QC, Canada.ORCID 0000-0001-6819-8699

Funding

The evaluation of a mHealth platform for diarrheal disease decision support and real-time epidemiologyR21TW010182 · FIC · UNIVERSITY OF FLORIDA · PI KHAN, ASHRAFUL ISLAM, NELSON, ERIC JORGE · 2016 to 2017
$320k
FIC NIH HHS R21 TW010182
6 · The paper itself

Abstract

Antibiotics are known to trigger prophage induction in controlled laboratory settings, but it remains unclear whether this also occurs within microbiomes in nature. Current methods investigating the link between antibiotics and prophage induction within the human gut rely on

Identifiers

PMID41959308
PMCPMC13061018

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.