Evidence map›Paper›PMID 41958981›Full record

ArticlebioRxiv : the preprint server for biology2026

Scott F Daniel, Changkyu Lee, Tyler Mollenkopf, Matthew Lee, Joel Arbuckle, Elysha Fiabane, Mariano I Gabitto, Nelson Johansen, Inkar Kapen, Andrew W Kraft and 19 more

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

29 authors.

Scott F DanielAllen Institute for Brain Science; Seattle, WA, 98109.ORCID 0000-0001-8319-2359
Changkyu LeeAllen Institute for Brain Science; Seattle, WA, 98109.ORCID 0000-0001-6146-0404
Tyler MollenkopfAllen Institute for Brain Science; Seattle, WA, 98109.ORCID 0000-0002-2899-2879
Matthew LeeBroad Institute of Harvard and MIT, Cambridge, MA, USA.
Joel ArbuckleAllen Institute for Brain Science; Seattle, WA, 98109.ORCID 0009-0004-8220-3502
Elysha FiabaneAllen Institute for Brain Science; Seattle, WA, 98109.
Mariano I GabittoAllen Institute for Brain Science; Seattle, WA, 98109.ORCID 0000-0001-6911-344X
Nelson JohansenAllen Institute for Brain Science; Seattle, WA, 98109.ORCID 0000-0002-4436-969X
Inkar KapenAllen Institute for Brain Science; Seattle, WA, 98109.ORCID 0009-0007-0159-0590
Andrew W KraftBroad Institute of Harvard and MIT, Cambridge, MA, USA.
Jane LaiAllen Institute for Brain Science; Seattle, WA, 98109.
Su Ying LiAllen Institute for Brain Science; Seattle, WA, 98109.ORCID 0009-0003-3056-1458
Ryan McGintyAllen Institute for Brain Science; Seattle, WA, 98109.ORCID 0009-0007-5534-5865
Jeremy A MillerAllen Institute for Brain Science; Seattle, WA, 98109.ORCID 0000-0003-4549-588X
Skyler Welch-MoosmanAllen Institute for Brain Science; Seattle, WA, 98109.ORCID 0009-0007-0734-9554
Sven OttoAllen Institute for Brain Science; Seattle, WA, 98109.ORCID 0009-0002-8383-4272
Lane SawyerAllen Institute for Brain Science; Seattle, WA, 98109.ORCID 0000-0002-7955-0130
Noah ShepardAllen Institute for Brain Science; Seattle, WA, 98109.
Carol L ThompsonAllen Institute for Brain Science; Seattle, WA, 98109.ORCID 0000-0003-1528-3237
Andreas TjärnbergAllen Institute for Brain Science; Seattle, WA, 98109.ORCID 0000-0003-0064-1791
Jack WatersAllen Institute for Brain Science; Seattle, WA, 98109.ORCID 0000-0002-2312-4183
Xingjian ZhenAllen Institute for Brain Science; Seattle, WA, 98109.ORCID 0000-0002-2220-8246
Evan MacoskoBroad Institute of Harvard and MIT, Cambridge, MA, USA.ORCID 0000-0002-2794-5165
Ed S LeinAllen Institute for Brain Science; Seattle, WA, 98109.ORCID 0000-0001-9012-6552
Lydia NgAllen Institute for Brain Science; Seattle, WA, 98109.ORCID 0000-0002-7499-3514
Hongkui ZengAllen Institute for Brain Science; Seattle, WA, 98109.ORCID 0000-0002-0326-5878
Shoaib MuftiAllen Institute for Brain Science; Seattle, WA, 98109.ORCID 0000-0002-8173-3884
Zizhen YaoAllen Institute for Brain Science; Seattle, WA, 98109.ORCID 0000-0002-9361-5607
Michael J HawrylyczAllen Institute for Brain Science; Seattle, WA, 98109.ORCID 0000-0002-5741-8024

Funding

A Community Framework for Data-driven Brain Transcriptomic Cell Type Definition, Ontology, and NomenclatureRF1MH123220 · NIMH · ALLEN INSTITUTE · PI HAWRYLYCZ, MICHAEL, LEIN, ED · 2020 to 2020
$2.8M
NIMH NIH HHS RF1 MH123220
6 · The paper itself

Abstract

Single-cell mapping methods convert raw, heterogeneous single-cell datasets into interpretable and comparable representations of biological identity. As reference cell-type taxonomies mature, mapping new datasets to shared references has become a central strategy for enabling cross-study integration, reproducible annotation, and cumulative biological knowledge. Here we present

Identifiers

PMID41958981
PMCPMC13060854

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.