Evidence map›Paper›PMID 41957590›Full record

ArticleBMC plant biology2026

QTL analysis uncovers the genetic architecture of resistance to chocolate spot disease caused by four Botrytis species on faba bean.

Maniruzzaman, Marja Jalli, Alan H Schulman, Hamid Khazaei, Frederick L Stoddard

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Article in BMC plant biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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5 · Who and what money

Authors and funding

5 authors.

ManiruzzamanDepartment of Agricultural Sciences, University of Helsinki, (Latokartanonkaari 5-7) FI-00014, PO Box 27, Helsinki, Finland. maniruzzaman.maniruzzaman@helsinki.fi.ORCID http://orcid.org/0000-0002-4999-5200
Marja JalliNatural Resources Institute Finland, Latokartanonkaari 9, 00790, Helsinki, Finland.ORCID http://orcid.org/0000-0003-3574-9639
Alan H SchulmanInstitute of Biotechnology and Viikki Plant Science Centre, University of Helsinki, Helsinki, Finland.ORCID http://orcid.org/0000-0002-4126-6177
Hamid Khazaei *Department of Agricultural Sciences, University of Helsinki, (Latokartanonkaari 5-7) FI-00014, PO Box 27, Helsinki, Finland.ORCID http://orcid.org/0000-0002-5202-8764
Frederick L Stoddard *Department of Agricultural Sciences, University of Helsinki, (Latokartanonkaari 5-7) FI-00014, PO Box 27, Helsinki, Finland.ORCID http://orcid.org/0000-0002-8097-5750

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundChocolate spot (CS), caused by Botrytis species, is a major disease constraining faba bean production worldwide. We investigated the genetic basis of resistance to four Botrytis species (B. fabae, B. cinerea, B. pseudocinerea, and B. fabiopsis) using a recombinant inbred line (RIL) population derived from the cross Mélodie/2 × ILB 938/2, which was evaluated with a detached-leaf assay.

resultsSignificant variation in disease severity was observed among parental lines and RILs for all four Botrytis species. The detached-leaf assay showed a strong correlation with a whole-plant assay conducted using a different B. fabae isolate, validating its effectiveness as a screening tool. QTL analysis identified six loci associated with response to Botrytis infection across Chr1, Chr4, and Chr6, explaining 7–11% of the total phenotypic variance. The overlapping QTLs on Chr1 conferred partial resistance to all four Botrytis species, while QTLs on Chr4 and Chr6 were specific to B. fabae. None of the other three species showed a unique QTL. Putative candidate gene analysis within QTL intervals revealed several defense-related gene families, including F-box protein, WRKY, MYB, and AP2/ERF transcription factors, and peroxidases involved in oxidative stress regulation.

conclusionThe consistency of response across species and the lack of unique responses from the non-fabae species suggests that selection for resistance to B. fabae may also select resistance to other Botrytis species. This study provides new insights into the shared and species-specific genetic architecture of Botrytis resistance in faba bean.

Indexed as

BotrytisDisease ResistancePlant DiseasesQuantitative Trait LociVicia fabaChromosome MappingBotrytis spp.Candidate geneDisease resistanceGene mappingQuantitative trait loci

Identifiers

PMID41957590
PMCPMC13173894

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.