Evidence map›Paper›PMID 41957375›Full record

ArticleScientific data2026

Haplotype-resolved chromosomal-level genome assembly of Chrysaora achlyos (black sea nettle).

Yueyue Li, Xuelu Yu, Bingbing Li, Yajuan Peng, Xue Wang, Zhengfeng Hao, Xiao Huang, Shirong Lv, Yulong Fan, Jianbo Jian and 2 more

Abstract readDataset
PubMed Full text at PMC Publisher
In one paragraph

Article in Scientific data, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Yueyue Li *Naval Medical Center of PLA, Naval Medical University, Shanghai, 200052, China.ORCID 0009-0000-6735-8128
Xuelu Yu *Naval Medical Center of PLA, Naval Medical University, Shanghai, 200052, China.
Bingbing Li *Naval Medical Center of PLA, Naval Medical University, Shanghai, 200052, China.
Yajuan Peng *BGI Genomics, Shenzhen, 518083, China.
Xue WangNaval Medical Center of PLA, Naval Medical University, Shanghai, 200052, China.
Zhengfeng HaoNaval Medical Center of PLA, Naval Medical University, Shanghai, 200052, China.
Xiao HuangNaval Medical Center of PLA, Naval Medical University, Shanghai, 200052, China.
Shirong LvNaval Medical Center of PLA, Naval Medical University, Shanghai, 200052, China.
Yulong FanBGI Genomics, Shenzhen, 518083, China.
Jianbo JianGuangdong Provincial Key Laboratory of Marine Biotechnology, Shantou University, Shantou, 515063, China. jbjian@126.com.
Xiaoyu GengNaval Medical Center of PLA, Naval Medical University, Shanghai, 200052, China. 15339625597@163.com.
Jishun YangDepartment of Pharmacy, Changzheng Hospital, Naval Medical University, Shanghai, 200003, China. jasunyang@foxmail.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chrysaora achlyos is a distinctive scyphozoan species characterized by its dark pigmentation and large size. In this study, we generated a haplotype-resolved, chromosome-scale genome assembly for C.achlyos using PacBio HiFi long reads and Hi-C technology. The resulting assembly comprises two haplotypes with sizes of 246.43 Mb (contig N50 = 7.69 Mb) and 248.65 Mb (contig N50 = 7.23 Mb), Additionally, repetitive sequences were characterized, with 110.52 Mb (~44.85%) in haplotype A and 112.57 Mb (~45.27%) in haplotype B. A total of 20,471 and 20,606 protein-coding genes were predicted in haplotypes A and B, respectively. The sequencing depth, mapping coverage, contig continuity, and BUSCO assessment collectively indicated a high-quality haplotype-resolved genome assembly. This high-quality genome assembly provides a foundation for future studies in comparative evolution, toxicology, ecology, and functional genomics.

Indexed as

GenomeHaplotypesAnimalsChromosomes

Identifiers

PMID41957375
PMCPMC13243596

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.