Evidence map›Paper›PMID 41957023›Full record

ArticleNature communications2026

SETDB1 and HUSH modulate Xist RNA levels during establishment of X chromosome inactivation.

Mafalda Almeida, Guifeng Wei, Adam D Cawte, Tatyana B Nesterova, Neil Brockdorff

Abstract read
In one paragraph

Article in Nature communications, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Mechanistic insights into the lncRNA-Notch signaling axis in tumors.Frontiers in cell and developmental biology · 2026
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Mafalda AlmeidaDevelopmental Epigenetics lab, Department of Biochemistry, University of Oxford, Oxford, UK.ORCID http://orcid.org/0000-0002-3894-4248
Guifeng WeiDevelopmental Epigenetics lab, Department of Biochemistry, University of Oxford, Oxford, UK.ORCID http://orcid.org/0000-0002-5698-426X
Adam D CawteDevelopmental Epigenetics lab, Department of Biochemistry, University of Oxford, Oxford, UK.ORCID http://orcid.org/0000-0002-0034-989X
Tatyana B NesterovaDevelopmental Epigenetics lab, Department of Biochemistry, University of Oxford, Oxford, UK.ORCID http://orcid.org/0000-0001-7740-4386
Neil BrockdorffDevelopmental Epigenetics lab, Department of Biochemistry, University of Oxford, Oxford, UK. neil.brockdorff@bioch.ox.ac.uk.ORCID http://orcid.org/0000-0003-4838-2653

Funding

Wellcome Trust (Wellcome) 215513/Z/19/Z
6 · The paper itself

Abstract

The non-coding RNA Xist mediates X chromosome inactivation (XCI) in mammals, functioning in cis to direct heterochromatin formation over a single X chromosome in cells of early female embryos. Prior studies have determined that Xist transcription and turnover are modulated to maintain the correct level of Xist RNA to inactivate a single X chromosome. The underlying molecular mechanisms are poorly understood. In this study we demonstrate that RNA-dependent recruitment of the H3K9me3 methyltransferase SETDB1 and the HUSH complex across the transcribed Xist locus functions to suppress Xist transcription during establishment of XCI. Thus, degron-mediated acute depletion of SETDB1 or core HUSH subunits abrogates allelic H3K9me3 deposition, increasing Xist transcription, accumulation of Xist RNA, and the rate of X-linked gene silencing. Our findings support a model in which the SETDB1/HUSH pathway coordinates Xist transcription rates to maintain optimal Xist RNA levels, ensuring the silencing of a single X chromosome.

Indexed as

Histone-Lysine N-MethyltransferaseRNA, Long NoncodingX Chromosome InactivationAnimalsFemaleGene SilencingHistonesMiceTranscription, GeneticX ChromosomeHistone-Lysine N-MethyltransferaseHistonesRNA, Long NoncodingSETDB1 protein, mouseXIST non-coding RNA

Identifiers

PMID41957023
PMCPMC13243529

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.