Evidence map›Paper›PMID 41951971›Full record

ArticlePlanta2026

Transcriptional footprints associated with bud fertility in grapevine development (Vitis vinifera L.).

Francesco Girardi, Giorgia Bettio, Angela Rasori, Monica Canton, Alessandro Botton

Abstract read
In one paragraph

Article in Planta, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Francesco GirardiDepartment of Agronomy, Food, Natural resources, Animals and Environment - DAFNAE, University of Padova, Agripolis, - Viale dell'Università 16, 35020, Legnaro - PD, Italy.
Giorgia BettioDepartment of Agronomy, Food, Natural resources, Animals and Environment - DAFNAE, University of Padova, Agripolis, - Viale dell'Università 16, 35020, Legnaro - PD, Italy.
Angela RasoriDepartment of Agronomy, Food, Natural resources, Animals and Environment - DAFNAE, University of Padova, Agripolis, - Viale dell'Università 16, 35020, Legnaro - PD, Italy.
Monica CantonDepartment of Agronomy, Food, Natural resources, Animals and Environment - DAFNAE, University of Padova, Agripolis, - Viale dell'Università 16, 35020, Legnaro - PD, Italy.
Alessandro BottonDepartment of Agronomy, Food, Natural resources, Animals and Environment - DAFNAE, University of Padova, Agripolis, - Viale dell'Università 16, 35020, Legnaro - PD, Italy. alessandro.botton@unipd.it.ORCID http://orcid.org/0000-0001-5054-1479

Funding

Università degli Studi di Padova 37th cycle of the doctoral programUniversità degli Studi di Padova DOR 2182278/21Università degli Studi di Padova DOR 2242222/22Università degli Studi di Padova DOR 2378193/23
6 · The paper itself

Abstract

MAIN

conclusionTranscriptomic analyses carried out on buds at different positions and developmental stages reveal the functional domains mainly involved in determining bud fertility in grapevine, with a focus on hormone signalling and floral integrators. Bud fruitfulness in grapevine (Vitis vinifera L.) depends on complex interactions between developmental stage, node position and hormonal regulation. In this study, transcriptomic analyses were performed on buds of cv. Merlot collected at three phenological stages (BBCH63, BBCH77 and BBCH90) from three node positions (2, 5 and 10), representing basal, intermediate and apical fertility patterns. RNA-Seq data revealed that phenological stage was the primary driver of transcriptional variation, while node position contributed to intra-stage differences. BBCH77 emerged as the most transcriptionally dynamic phase. Differential expression, enrichment analyses and WGCNA highlighted distinct developmental trajectories among nodes. Buds at node 5, characterized by lower fertility, showed transcriptional signatures associated with enhanced gibberellin biosynthesis and signalling, early activation of dormancy-related pathways, and complex hormonal interplay involving ethylene. In contrast, buds at node 10 displayed transcriptional features consistent with sustained auxin flux from the shoot apical meristem and reduced local inhibitory signalling, potentially supporting higher fertility. Cytokinin-related genes showed stage-dependent activation, particularly at BBCH77, suggesting a transient promotive role during floral transition. Expression profiling of flowering-related genes confirmed stage-dependent regulation of major floral integrators and revealed position-specific modulation of key regulators. Overall, the integration of positional and temporal transcriptomics supports a working model in which bud fertility results from the dynamic balance between stimulatory (auxin, cytokinins) and inhibitory (gibberellins, ethylene, ABA) signals, modulated by developmental stage and meristem proximity.

Indexed as

FlowersVitisCytokininsEthylenesFertilityFruitGene Expression ProfilingGene Expression Regulation, DevelopmentalGene Expression Regulation, PlantGibberellinsMeristemPlant Growth RegulatorsSignal TransductionTranscriptomeCytokininsEthylenesGibberellinsPlant Growth RegulatorsBud fruitfulnessFloral transitionHormonesNode positionPhenological stageRNA-Seq

Identifiers

PMID41951971
PMCPMC13061797

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.