Evidence map›Paper›PMID 41951277›Full record

ArticleJHEP reports : innovation in hepatology2026

Geography-independent mucosal microbiota alterations in primary sclerosing cholangitis persist after liver transplantation.

Lukas Bajer, Petra Polakovicova, Marie Heczkova, Kristian Holm, Mikal J Hole, Mojmir Hlavaty, Alena Bohdanecka, Pavel Drastich, Filip Tichanek, Malin H Meyer-Myklestad and 9 more

Abstract read
In one paragraph

Article in JHEP reports : innovation in hepatology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

Lukas BajerInstitute for Clinical and Experimental Medicine, Department of Hepatogastroenterology, Prague, CR, Czech Republic; Department of Internal Medicine, 2(nd) Faculty of Medicine, Charles University, Prague, CR, Czech Republic.
Petra PolakovicovaInstitute for Clinical and Experimental Medicine, Center for Experimental Medicine, Prague, CR, Czech Republic; Faculty of Science, Charles University, Prague, CR, Czech Republic.
Marie HeczkovaInstitute for Clinical and Experimental Medicine, Center for Experimental Medicine, Prague, CR, Czech Republic.
Kristian HolmNorwegian PSC Research Center, Department of Transplantation Medicine, Oslo University Hospital, Oslo, Norway; Institute of Clinical Medicine, University of Oslo, Oslo, Norway; Research Institute of Internal Medicine, Oslo University Hospital, Oslo, Norway.
Mikal J HoleNorwegian PSC Research Center, Department of Transplantation Medicine, Oslo University Hospital, Oslo, Norway; Institute of Clinical Medicine, University of Oslo, Oslo, Norway; Research Institute of Internal Medicine, Oslo University Hospital, Oslo, Norway.
Mojmir HlavatyInstitute for Clinical and Experimental Medicine, Department of Hepatogastroenterology, Prague, CR, Czech Republic; First Faculty of Medicine, Charles University, Prague, CR, Czech Republic.
Alena BohdaneckaInstitute for Clinical and Experimental Medicine, Center for Experimental Medicine, Prague, CR, Czech Republic; First Faculty of Medicine, Charles University, Prague, CR, Czech Republic.
Pavel DrastichInstitute for Clinical and Experimental Medicine, Department of Hepatogastroenterology, Prague, CR, Czech Republic.
Filip TichanekInstitute for Clinical and Experimental Medicine, Department of Data Science, Prague, CR, Czech Republic.
Malin H Meyer-MyklestadDepartment of Infectious Diseases, Division of Medicine, Oslo University Hospital, Oslo, Norway; Department of Microbiology, Division of Laboratory Medicine, Oslo University Hospital, Oslo, Norway.
Asle W MedhusInstitute of Clinical Medicine, University of Oslo, Oslo, Norway; Department of Gastroenterology, Division of Medicine, Oslo University Hospital, Oslo, Norway.
Dag Henrik ReikvamInstitute of Clinical Medicine, University of Oslo, Oslo, Norway; Department of Infectious Diseases, Division of Medicine, Oslo University Hospital, Oslo, Norway.
Kristin K JørgensenNorwegian PSC Research Center, Department of Transplantation Medicine, Oslo University Hospital, Oslo, Norway; Institute of Clinical Medicine, University of Oslo, Oslo, Norway; Department of Gastroenterology, Akershus University Hospital, Lørenskog, Norway.
Jan BrezinaInstitute for Clinical and Experimental Medicine, Department of Hepatogastroenterology, Prague, CR, Czech Republic.
Peter MacingaInstitute for Clinical and Experimental Medicine, Department of Hepatogastroenterology, Prague, CR, Czech Republic.
Pavel WohlInstitute for Clinical and Experimental Medicine, Department of Hepatogastroenterology, Prague, CR, Czech Republic.
Ondrej FabianInstitute for Clinical and Experimental Medicine, Department of Pathology, Prague, CR, Czech Republic.
Johannes R HovNorwegian PSC Research Center, Department of Transplantation Medicine, Oslo University Hospital, Oslo, Norway; Institute of Clinical Medicine, University of Oslo, Oslo, Norway; Research Institute of Internal Medicine, Oslo University Hospital, Oslo, Norway; Section of Gastroenterology, Department of Transplantation Medicine, Oslo University Hospital, Oslo, Norway.
Monika CahovaInstitute for Clinical and Experimental Medicine, Center for Experimental Medicine, Prague, CR, Czech Republic. Electronic address: monika.cahova@ikem.cz.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BACKGROUND &

aimsPrimary sclerosing cholangitis (PSC)-associated alterations of fecal gut microbiota have already been described, but data on the mucosal microbiota are still limited. We aimed to further define disease-specific mucosal microbial patterns independent of geography and assess the relationship to liver transplantation (LTx), gut inflammation (inflammatory bowel disease), and PSC recurrence (rPSC).

methodsWe performed 16S ribosomal RNA gene (V3-V4) sequencing of ileocolonic biopsies from 115 patients with PSC (pre-LTx), 159 liver-transplanted patients (post_LTx, recurrence occurred in 38), and 96 healthy controls (HC) from Norway and the Czech Republic.

resultsAlpha diversity was lower in all PSC groups compared with HC. Elastic net models discriminated pre_LTx (AUC ileum 0.97; colon 0.93; p <0.001) and post_LTx PSC patients (AUC ileum 0.97; colon 0.97; p <0.001) from HC, and distinguished pre_LTx from post_LTx (AUC ileum 0.83; colon 0.83; p <0.001). The shared, cohort-independent PSC microbiota was dominated by Enterococcus, Pseudomonas, Veillonella, Klebsiella, and Streptococcus, while several common commensals were underrepresented. A microbial dysbiosis index calculated from PSC-associated genera correlated negatively with alpha diversity and serum albumin, while a positive correlation was observed with markers of cholestatic disease (ALP, GGT) and liver fibrosis (APRI). There were no associations with the presence of inflammatory bowel disease or fecal calprotectin. Differences between post-LTx patients with and without recurrence were limited, but several genera deregulated in pre-LTx PSC (Klebsiella, Bilophila, Coprococcus, Odoribacter) showed similar trends in rPSC.

conclusionsOur findings in two European countries revealed a distinct mucosal microbiota composition associated with PSC that persists after LTx. These microbial patterns correlate with the severity of liver injury in PSC but not with markers of intestinal inflammation. IMPACT AND IMPLICATIONS: This study provides an extensive evaluation of mucosa-associated microbiota in primary sclerosing cholangitis (PSC) before and after liver transplantation across two European cohorts. The persistence of PSC-related dysbiosis after transplantation highlights the importance of the gut-liver axis in PSC and supports further investigation into microbiota-driven mechanisms. Together with the strong association between microbiota composition and markers of cholestasis and fibrosis, this suggests potential clinical utility as an indicator of disease activity or even as a target for prevention or therapy.

Indexed as

IBDliver transplantationmachine learningmucosal microbiomepredictive signatureprimary sclerosing cholangitisrecurrence

Identifiers

PMID41951277
PMCPMC12972987

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.