Evidence map›Paper›PMID 41949329›Full record

ArticlemBio2026

A new highly discriminatory typing scheme for

Marta Pla-Díaz, Lorenzo Giacani, Lauren C Tantalo, Mahashweta Bose, Tara B Reid, Christina M Marra, David Šmajs, Petra Pospíšilová, Klára Janečková, Takuya Kawahata and 15 more

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in mBio, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Formal description ofInternational journal of systematic and evolutionary microbiology · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

25 authors.

Marta Pla-DíazJoint Research Unit Infection and Public Health FISABIO-Univ. Valencia, Institute for Integrative Systems Biology (I2SysBio, CSIC-UV), Valencia, Spain.
Lorenzo GiacaniDepartment of Medicine, Division of Allergy and Infectious Diseases, University of Washington, Seattle, Washington, USA.
Lauren C TantaloDepartment of Medicine, Division of Allergy and Infectious Diseases, University of Washington, Seattle, Washington, USA.
Mahashweta BoseDepartment of Medicine, Division of Allergy and Infectious Diseases, University of Washington, Seattle, Washington, USA.
Tara B ReidDepartment of Medicine, Division of Allergy and Infectious Diseases, University of Washington, Seattle, Washington, USA.
Christina M MarraDepartment of Neurology, University of Washington School of Medicine, Seattle, Washington, USA.ORCID 0000-0001-9313-2800
David ŠmajsDepartment of Biology, Faculty of Medicine, Masaryk University, Brno, Czech Republic.
Petra PospíšilováDepartment of Biology, Faculty of Medicine, Masaryk University, Brno, Czech Republic.
Klára JanečkováDepartment of Biology, Faculty of Medicine, Masaryk University, Brno, Czech Republic.
Takuya KawahataDivision of Microbiology, Osaka Institute of Public Health, Osaka, Japan.
Fumiya BannoDivision of Microbiology, Osaka Institute of Public Health, Osaka, Japan.
Kendra VilfortCenters for Disease Control and Prevention, Atlanta, Georgia, USA.
Weiping CaoCenters for Disease Control and Prevention, Atlanta, Georgia, USA.
Allan PillayCenters for Disease Control and Prevention, Atlanta, Georgia, USA.
Angel NodaNational Reference Laboratory of Treponemes and Special Pathogens, Tropical Medicine Institute "Pedro Kourí", Havana, Cuba.
Philipp P BosshardUniversity Hospital Zurich, University of Zurich, Zurich, Switzerland.
Marcus ChenSchool of Translational Medicine, Monash University, Melbourne, Victoria, Australia.
Oriol MitjàISGlobal, Barcelona, Spain.
Verena J SchuenemannInstitute of Evolutionary Medicine, University of Zurich, Zurich, Switzerland.
Simon HacklInstitute for Bioinformatics and Medical Informatics, University of Tübingen, Tübingen, Germany.
Kay NieseltInstitute for Bioinformatics and Medical Informatics, University of Tübingen, Tübingen, Germany.
Pablo Hernández-BelDermatology Service, Consorcio Hospital General Universitario, Valencia, Spain.
M Dolores OceteMicrobiology Service, Consorcio Hospital General Universitario, Valencia, Spain.
Natasha AroraZurich Institute of Forensic Medicine, University of Zurich, Zurich, Switzerland.ORCID 0000-0002-6144-4743
Fernando González-CandelasJoint Research Unit Infection and Public Health FISABIO-Univ. Valencia, Institute for Integrative Systems Biology (I2SysBio, CSIC-UV), Valencia, Spain.ORCID 0000-0002-0879-5798

Funding

University of Washington (UW) Sexually Transmitted Infections (STI) Cooperative Research Center (CRC) - Syphilis Vaccine to Protect against Local and Disseminated T. pallidum InfectionU19AI144133 · NIAID · UNIVERSITY OF WASHINGTON · PI KOELLE, DAVID M · 2019 to 2023
$10.6M
NIAID NIH HHS U19 AI144133NIH HHS NIH U19 AI144133Swiss National Foundation 188963
6 · The paper itself

Abstract

The global resurgence of treponematoses, particularly syphilis, poses a growing public health challenge. Despite advances in sequencing technologies, obtaining complete IMPORTANCE: We have developed a new multilocus typing (MLST) scheme useful for all

Indexed as

Genetic VariationMolecular TypingTreponema pallidumDNA, BacterialDrug Resistance, BacterialGenome, BacterialGenotypeHumansMacrolidesPhylogenyRNA, Ribosomal, 23SSequence Analysis, DNASyphilisDNA, BacterialMacrolidesRNA, Ribosomal, 23Sbejelgenetic diversityMLSTmolecular epidemiologypopulation structuresyphilisTreponema pallidumyaws

Identifiers

PMID41949329
PMCPMC13170356

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.