Evidence map›Paper›PMID 41948103›Full record

ArticleInternational journal of genomics2026

Comprehensive Analysis Based on the Cancer-Immunity Cycle Identifies a Novel Immunosuppressive Subtype of Bladder Cancer.

Zexun Deng, Yifan Li, Yuyong Shen, Ming Zhou

Abstract read
In one paragraph

Article in International journal of genomics, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Zexun DengDepartment of Urology, The Affiliated Hospital of Yangzhou University, Yangzhou University, Yangzhou, Jiangsu, China, yzu.edu.cn.
Yifan LiDepartment of Urology, The Affiliated Hospital of Yangzhou University, Yangzhou University, Yangzhou, Jiangsu, China, yzu.edu.cn.
Yuyong ShenDepartment of Urology, The Affiliated Hospital of Yangzhou University, Yangzhou University, Yangzhou, Jiangsu, China, yzu.edu.cn.
Ming ZhouDepartment of Urology, The Affiliated Hospital of Yangzhou University, Yangzhou University, Yangzhou, Jiangsu, China, yzu.edu.cn.ORCID https://orcid.org/0009-0003-3293-5054

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Immune checkpoint blockade (ICB) has reshaped the approach to treating a broad spectrum of cancers, including bladder cancer (BLCA). However, a substantial fraction of BLCA patients still exhibit resistance despite high programmed death-ligand 1(PD-L1) expression in the tumor. Consequently, it is imperative to characterize the tumor immunosuppressive microenvironment (TME) and ascertain key biomarkers associated with immune evasion in order to stratify patients according to their propensity for immunotherapy resistance. Methods: A retrospective analysis of RNA sequencing data sourced from 403 BLCA samples was conducted during the course of our experimental research. Our research team employed weighted gene coexpression network profiling (WGCNA) and machine learning models to uncover tumor-immune cycle-associated genes that are tightly linked to BLCA. Unsupervised clustering was implemented to explore the tumor microenvironment-associated gene expression profiles. Subsequently, in turn, we drew correlations between these expression signatures and a group of T cell exhaustion indicators, receptors, and immunotherapy responsiveness to further categorize them. Finally, a set of experiments were executed to verify the putative role of the core gene BIRC5 in BLCA at the experimental level. Results: Through comprehensive analysis, BIRC5, HSPA12A, and CXCL12 were identified as hub genes. Additionally, based on the molecular expression profiles of these three hub genes, BLCA patients were stratified into distinct subgroups. Simultaneously, this classification was correlated with the immune microenvironment landscape and established the exhausted immune class (EIC)-a novel subtype with high PD-L1 expression, exhausted T cell markers, and immunosuppressive cytokines-in BLCA patients. Finally, we confirmed that BIRC5 exhibited high expression levels in BLCA and was involved in modulating the malignant proliferation, migratory activity, and invasive behavior of BLCA cells in vitro. Conclusion: The investigative group validated the oncogenic activity of BIRC5, a gene correlated with the tumor-immune cycle. Additionally, our research team has identified a novel molecular subtype of BLCA that exhibits high expression of PD-L1 but may potentially exhibit resistance to ICB therapy. These findings offer valuable insights into comprehensively characterizing the immunosuppressive tumor microenvironment in BLCA and present opportunities for deepened scrutiny of immunotherapy resistance mechanisms and optimization of targeted immunotherapeutic regimens.

Indexed as

BIRC5()bladder cancer (BLCA)cancer-immunity cycleexhausted immune class (EIC)immune checkpoint blockade (ICB)

Identifiers

PMID41948103
PMCPMC13051804

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.