Evidence map›Paper›PMID 41946992›Full record

ArticleThe EMBO journal2026

Global analysis of cancer cell responses to USP9X inhibition.

Philipp Schenk, Shane M Devine, Simon A Cobbold, Niall D Geoghegan, Elizabeth L Kyran, Ching-Seng Ang, Jack A Alexandrovics, Dale J Calleja, Dylan H Multari, Vineet Vaibhav and 9 more

Abstract read
In one paragraph

Article in The EMBO journal, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

Philipp SchenkThe Walter and Eliza Hall Institute for Medical Research, Parkville, VIC, Australia.ORCID http://orcid.org/0000-0001-6044-1068
Shane M DevineThe Walter and Eliza Hall Institute for Medical Research, Parkville, VIC, Australia.ORCID http://orcid.org/0000-0001-8727-7392
Simon A CobboldThe Walter and Eliza Hall Institute for Medical Research, Parkville, VIC, Australia.ORCID http://orcid.org/0000-0002-9927-8998
Niall D GeogheganThe Walter and Eliza Hall Institute for Medical Research, Parkville, VIC, Australia.
Elizabeth L KyranThe Walter and Eliza Hall Institute for Medical Research, Parkville, VIC, Australia.
Ching-Seng AngBio21 Molecular Science and Biotechnology Institute, University of Melbourne, Parkville, VIC, Australia.
Jack A AlexandrovicsThe Walter and Eliza Hall Institute for Medical Research, Parkville, VIC, Australia.
Dale J CallejaThe Walter and Eliza Hall Institute for Medical Research, Parkville, VIC, Australia.ORCID http://orcid.org/0000-0002-8306-0900
Dylan H MultariThe Walter and Eliza Hall Institute for Medical Research, Parkville, VIC, Australia.ORCID http://orcid.org/0000-0001-6932-9881
Vineet VaibhavThe Walter and Eliza Hall Institute for Medical Research, Parkville, VIC, Australia.
Bernadine G C LuThe Walter and Eliza Hall Institute for Medical Research, Parkville, VIC, Australia.ORCID http://orcid.org/0000-0001-8044-9710
Theresa A KlemmThe Walter and Eliza Hall Institute for Medical Research, Parkville, VIC, Australia.ORCID http://orcid.org/0000-0002-2847-3550
Laura F DagleyThe Walter and Eliza Hall Institute for Medical Research, Parkville, VIC, Australia.
Kym N LowesThe Walter and Eliza Hall Institute for Medical Research, Parkville, VIC, Australia.
Nicholas A WilliamsonBio21 Molecular Science and Biotechnology Institute, University of Melbourne, Parkville, VIC, Australia.ORCID http://orcid.org/0000-0002-2173-3452
Pieter J A EichhornCurtin Medical School, Curtin University, Bentley, WA, Australia.ORCID http://orcid.org/0000-0001-5840-943X
Ashley P NgThe Walter and Eliza Hall Institute for Medical Research, Parkville, VIC, Australia.ORCID http://orcid.org/0000-0001-9690-0879
Rebecca FelthamThe Walter and Eliza Hall Institute for Medical Research, Parkville, VIC, Australia.ORCID http://orcid.org/0000-0001-8376-6869
David KomanderThe Walter and Eliza Hall Institute for Medical Research, Parkville, VIC, Australia. dk@wehi.edu.au.ORCID http://orcid.org/0000-0002-8092-4320

Funding

CCA | Cancer Council Western Australia (مجلس السرطان WA) CCWA2025/1401DHAC | Medical Research Future Fund (MRFF) EPCD000033DHAC | National Health and Medical Research Council (NHMRC) GNT117812
6 · The paper itself

Abstract

The ubiquitin-specific protease (USP) USP9X is a human deubiquitinase (DUB) with a large number of described targets and cellular roles. In cancer, USP9X is found as an oncogene or as a tumour suppressor depending on context, and its utility as a target for cancer therapy remains unclear. We here describe WEHI-092, a piperazine-based USP9X-specific small-molecule inhibitor, which binds to a unique region in the USP9X Fingers-subdomain, distinct from known DUB-inhibitor binding sites. Using proteomics and ubiquitinomics, we show that USP9X targets distinct substrates compared to USP7, yet the substrate profile of USP9X varies significantly across cancer cell lines. We reveal a core set of 17 proteins commonly regulated by USP9X in most cell lines, which we consider as proximal biomarkers for USP9X inhibition. Consistent with proteomics, we show in unrelated cell lines that WEHI-092 treatment arrests the cell cycle in metaphase without inducing cell death. This explains growth suppression in long-term clonogenic assays in most cancer cell lines, and positions USP9X inhibitors as a new class of selective mitotic poisons.

Indexed as

NeoplasmsPiperazinesUbiquitin ThiolesteraseCell Line, TumorHumansProteomicsUbiquitin-Specific Peptidase 7PiperazinesUbiquitin-Specific Peptidase 7Ubiquitin ThiolesteraseUSP7 protein, humanUSP9X protein, humanCancerDUB InhibitorSubstrate IdentificationUbiquitinomicsUSP9X

Identifiers

PMID41946992
PMCPMC13144739

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.