Evidence map›Paper›PMID 41946731›Full record

ArticleScientific data2026

Chromosome-level genome assembly of Phoebe chekiangensis, an endemic and endangered tree in east Asia.

Ying-Feng Hu, Ju Tang, Xiao-Hong Li, Zhi-Zhong Li, Jian-Wen Shao

Abstract readDataset
In one paragraph

Article in Scientific data, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Ying-Feng HuCollege of Life Sciences, Anhui Normal University, Wuhu, 241000, Anhui, China. huyf@ahnu.edu.cn.
Ju TangCollege of Life Sciences, Anhui Normal University, Wuhu, 241000, Anhui, China.
Xiao-Hong LiCollege of Life Sciences, Anhui Normal University, Wuhu, 241000, Anhui, China.
Zhi-Zhong LiCollaborative Innovation Center of Recovery and Reconstruction of Degraded Ecosystem in Wanjiang Basin, Anhui Normal University, Wuhu, 241002, China.
Jian-Wen ShaoCollege of Life Sciences, Anhui Normal University, Wuhu, 241000, Anhui, China. shaojw@ahnu.edu.cn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Phoebe chekiangensis is a rare nanmu species endemic to southeastern China that provides high-quality timber and has ecological and economic importance. Genomic resources for this genus are limited, constraining research on its genetic diversity, adaptive evolution, and conservation. Here we report a chromosome-level reference genome of P. chekiangensis generated using PacBio HiFi long reads, MGI short reads, and Hi-C sequencing. The assembled genome spans 918.59 Mb with a scaffold N50 of 68.99 Mb, and 98.88% of sequences were anchored to 12 pseudochromosomes. Repetitive elements account for 49.45% of the genome. A total of 34,381 protein-coding genes were predicted, of which 91.91% were functionally annotated. Genome quality was supported by a QV of 44.96 (99.99% base accuracy), a BUSCO completeness of 98.4%, and an LAI score of 14.32, meeting reference-quality standards. This high-quality genome provides a valuable resource for conservation genomics, evolutionary biology, and molecular breeding within Phoebe and the Lauraceae family.

Indexed as

Chromosomes, PlantGenome, PlantAsia, EasternEndangered Species

Identifiers

PMID41946731
PMCPMC13233860

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.