Evidence map›Paper›PMID 41945435›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2026

Elucidation of the aragonite nanofiber formation mechanism of LICP contained in the hinge ligament of

Kei Futagawa, Yuto Namikawa, Taichi Morioka, Haruki Meguro, Akira Shida, Yuki Nagano, Kazuo Furihata, Hiroyuki Watanabe, Fabio Nudelman, Taiga Okumura and 6 more

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Kei FutagawaDepartment of Applied Biological Chemistry, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo 113-8657, Japan.ORCID 0009-0004-4981-6657
Yuto NamikawaDepartment of Applied Biological Chemistry, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo 113-8657, Japan.ORCID 0000-0003-4312-636X
Taichi MoriokaDepartment of Applied Biological Chemistry, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo 113-8657, Japan.
Haruki MeguroDepartment of Applied Biological Chemistry, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo 113-8657, Japan.
Akira ShidaDepartment of Applied Biological Chemistry, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo 113-8657, Japan.
Yuki NaganoDepartment of Applied Biological Chemistry, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo 113-8657, Japan.
Kazuo FurihataDepartment of Applied Biological Chemistry, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo 113-8657, Japan.
Hiroyuki WatanabeDepartment of Applied Biological Chemistry, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo 113-8657, Japan.
Fabio NudelmanSchool of Chemistry, University of Edinburgh, Joseph Black Building, David Brewster Road, Edinburgh EH9 3FJ, United Kingdom.ORCID 0000-0001-7464-4309
Taiga OkumuraDepartment of Earth Sciences, School of Education, Faculty of Education and Integrated Arts and Sciences, Waseda University, Shinjuku-ku, Tokyo 169-8050, Japan.
Toshihiro KogureDepartment of Earth and Planetary Science, Graduate School of Science, University of Tokyo, Bunkyo-ku, Tokyo 113-0033, Japan.
Teppei IkeyaDepartment of Chemistry, Graduate School of Science, Tokyo Metropolitan University, Hachioji, Tokyo 192-0397, Japan.
Yutaka ItoDepartment of Chemistry, Graduate School of Science, Tokyo Metropolitan University, Hachioji, Tokyo 192-0397, Japan.ORCID 0000-0002-1030-4660
Hidekazu KatayamaLiberal Arts Center, Teikyo University, Utsunomiya, Tochigi 320-8551, Japan.ORCID 0000-0003-3367-9147
Koji NagataDepartment of Applied Biological Chemistry, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo 113-8657, Japan.
Michio SuzukiDepartment of Applied Biological Chemistry, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo 113-8657, Japan.ORCID 0000-0001-6150-8957

Funding

Environmental Restoration and Conservation Agency (ERCA) CN2201Grant-in-Aid for JSPS Fellows JP24KJ0914Grant-in-Aid for JSPS Fellows JP25KJ0900Grants in Aid for Scientific research A JP23H00339Grants in Aid for Scientific research B JP19H03045JST SPRING JPMJSP2108MEXT | JST | Core Research for Evolutional Science and Technology (CREST) JPMJCR21E5New Energy and Industrial Technology Development Organization (NEDO) JPNP22100161-0Sasakawa Scientific Research Grant 2024-4008Scientific research on Innovative areas JP19H05771Scientific research on Innovative areas JP25H01447Scientific research on Innovative areas JP25H01449
6 · The paper itself

Abstract

The hinge ligament of bivalves exhibits remarkable flexibility and compressive strength due to its composite structure of aragonite nanofibers embedded in an organic matrix. While these nanofibers are crucial for shell mechanics, the molecular mechanisms underlying their formation remain unclear. We investigated the function of a 10-residue intracrystalline peptide, ligament intracrystalline peptide (LICP), in regulating aragonite crystal growth. Using a solution-state NMR technique optimized for biomineral systems with dispersive calcium carbonate particles, we showed that LICP adopted a planar, elongated conformation in binding to aragonite. This structure features a coplanar arrangement of carboxyl and aromatic side chains-particularly tyrosines-that enables selective interaction with the aragonite {110}. Saturation transfer difference NMR and dose-dependent structural analyses confirmed that this conformational change is triggered by solid-phase contact, rather than free calcium ions. Molecular dynamics simulations revealed enhanced binding stability of LICP to the {110} surface through multiple carboxyl and aromatic residues. Furthermore, in vitro crystallization assays showed that LICP promoted elongation of aragonite crystals along the

Indexed as

Calcium CarbonateLigamentsNanofibersPeptidesPinctadaAnimalsCrystallizationMagnetic Resonance SpectroscopyMolecular Dynamics SimulationCalcium CarbonatePeptidesaragonite nanofiberbiomineralizationprotein–mineral interfacesolution NMR spectroscopy

Identifiers

PMID41945435
PMCPMC13080008

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.