Evidence map›Paper›PMID 41945406›Full record

ArticleActa crystallographica. Section D, Structural biology2026

Generation and modulation of catalytically relevant states of a dye-decolourizing peroxidase using time-resolved serial femtosecond crystallography with drop-on-chip mixing and X-ray-driven reduction.

Marina Lučić, Johan Glerup, Pierre Aller, Danny Axford, Nicholas Devenish, Jaehyun Park, Anastasiia Shilova, Arturo Landeros de la Isla, Richard W Strange, Tiankun Zhou and 3 more

Abstract read
In one paragraph

Article in Acta crystallographica. Section D, Structural biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0cells of the map it votes in
0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Marina LučićSchool of Life Sciences, University of Essex, Wivenhoe Park, Colchester CO4 3SQ, United Kingdom.
Johan GlerupDiamond Light Source, Harwell Science and Innovation Campus, Didcot OX11 0DE, United Kingdom.
Pierre AllerDiamond Light Source, Harwell Science and Innovation Campus, Didcot OX11 0DE, United Kingdom.ORCID 0000-0002-1793-7030
Danny AxfordDiamond Light Source, Harwell Science and Innovation Campus, Didcot OX11 0DE, United Kingdom.ORCID 0000-0001-7694-8525
Nicholas DevenishDiamond Light Source, Harwell Science and Innovation Campus, Didcot OX11 0DE, United Kingdom.ORCID 0009-0000-3030-6180
Jaehyun ParkPohang Accelerator Laboratory, POSTECH, Pohang, Gyeongbuk 37673, Republic of Korea.ORCID 0000-0002-9007-4892
Anastasiia ShilovaDiamond Light Source, Harwell Science and Innovation Campus, Didcot OX11 0DE, United Kingdom.ORCID 0000-0002-5931-5790
Arturo Landeros de la IslaDiamond Light Source, Harwell Science and Innovation Campus, Didcot OX11 0DE, United Kingdom.
Richard W StrangeSchool of Life Sciences, University of Essex, Wivenhoe Park, Colchester CO4 3SQ, United Kingdom.
Tiankun ZhouDiamond Light Source, Harwell Science and Innovation Campus, Didcot OX11 0DE, United Kingdom.ORCID 0000-0002-6116-7483
Robin L OwenDiamond Light Source, Harwell Science and Innovation Campus, Didcot OX11 0DE, United Kingdom.ORCID 0000-0002-2104-7057
Jonathan A R WorrallSchool of Life Sciences, University of Essex, Wivenhoe Park, Colchester CO4 3SQ, United Kingdom.ORCID 0000-0002-1863-834X
Michael A HoughSchool of Life Sciences, University of Essex, Wivenhoe Park, Colchester CO4 3SQ, United Kingdom.ORCID 0000-0001-7377-6713

Funding

Biotechnology and Biological Sciences Research Council BB/W001950/1Royal Society RSWF\R2\182017BWellcome Trust 210734/Z/18/Z
6 · The paper itself

Abstract

Metalloenzymes containing a heme cofactor catalyse a wide range of oxidative reactions critical to life. Understanding the structure and electronic states of the heme across the catalytic cycle is essential in understanding the oxidative chemistry performed on the substrate. This work demonstrates in crystallo manipulation of the heme-iron oxidation state in a B-type dye-decolourizing peroxidase from Streptomyces lividans (DtpB) using multiple, complementary, serial crystallography approaches. Fixed-target drop-on-chip serial femtosecond crystallography (SFX) together with dose-resolved serial synchrotron crystallography (SSX) allowed DtpB to be driven between multiple iron oxidation states. Drop-on-chip addition of hydrogen peroxide with fixed-target SFX is used to generate a ferryl [Fe(IV)=O] species, while the X-ray-driven approach modulates the iron oxidation state, with an apparent two-electron reduction leading to a return to a ferric state. The formation and dose response of the Fe(IV)-O state is highly variable between the chemically identical heme groups of the DtpB hexamer, highlighting the importance of understanding the effect of the crystalline lattice on observed changes in time- and dose-resolved crystallography.

Indexed as

Coloring AgentsPeroxidasesStreptomyces lividansCrystallography, X-RayHemeHydrogen PeroxideModels, MolecularOxidation-ReductionColoring AgentsHemeHydrogen PeroxidePeroxidasesferryl hemeheme enzymesperoxidasesradiation damageserial synchrotron crystallographytime-resolved crystallography

Identifiers

PMID41945406
PMCPMC13133994

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.