Evidence map›Paper›PMID 41942713›Full record

ArticleApplied microbiology and biotechnology2026

Enhanced biomass and desulfurization by recombinant Rhodococcus qingshengii IGTS8 in bioreactor cultures.

Olga Martzoukou, Dimitra Breyanni, Alexander L Savvides, Amalia D Karagouni, Diomi Mamma, Dimitris G Hatzinikolaou

Abstract read
In one paragraph

Article in Applied microbiology and biotechnology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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4 · The record

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5 · Who and what money

Authors and funding

6 authors.

Olga Martzoukou *Enzyme and Microbial Biotechnology Unit, Department of Biology, National and Kapodistrian University of Athens, Athens, Greece.
Dimitra Breyanni *Enzyme and Microbial Biotechnology Unit, Department of Biology, National and Kapodistrian University of Athens, Athens, Greece.
Alexander L SavvidesEnzyme and Microbial Biotechnology Unit, Department of Biology, National and Kapodistrian University of Athens, Athens, Greece.
Amalia D KaragouniEnzyme and Microbial Biotechnology Unit, Department of Biology, National and Kapodistrian University of Athens, Athens, Greece.
Diomi Mamma *Biotechnology Laboratory, Sector of Synthesis and Development of Industrial Processes (IV), School of Chemical Engineering, National Technical University of Athens, Athens, Greece. dmamma@chemeng.ntua.gr.
Dimitris G Hatzinikolaou *Enzyme and Microbial Biotechnology Unit, Department of Biology, National and Kapodistrian University of Athens, Athens, Greece. dhatzini@biol.uoa.gr.

Funding

Action RESEARCH - CREATE - INNOVATE co-financed by the European Union and national resources through the Operational Program "Competitiveness, Entrepreneurship & Innovation" (EPAnEK)- NSRF (2014-2020) T1EDK-02074, MIS 5030227
6 · The paper itself

Abstract

Rhodococcus qingshengii IGTS8 is a model strain well-known for its ability to remove sulfur from dibenzothiophene (DBT) and its derivatives via the 4S pathway, a process that catalyzes the conversion of DBT to 2-hydroxybiphenyl (2-HBP) and sulfite without losses in the energy content of the fuel. The desulfurization ability of the wild-type (wt) strain is limited due to repression of the dsz operon in the presence of bioavailable sulfur sources, including methionine and in some cases, sulfates, whereas genetic deletion of the reverse transsulfuration pathway enzymes, Cbs and MetB, alleviates this effect. Herein, we examined the growth and biodesulfurization activity of two genetically engineered R. qingshengii IGTS8 strains, Δcbs and ΔmetB, when grown in a stirred tank bioreactor in the presence of their preferred sulfur sources, sulfate and methionine, respectively. The Δcbs strain demonstrated the highest biomass concentration, but the lowest desulfurization activity, whereas ΔmetB, when grown in a repressive sulfur source, exhibited desulfurization activity comparable to that of the wt grown under non-repressive conditions. Investigation of the influence of ethanol and methionine supply for ΔmetB strain, highlighted carbon, and not sulfur concentration, as the critical factor for more efficient growth and desulfurization activity. The highest rates in batch mode were achieved in the presence of 165 mM ethanol and 2 mM methionine. Finally, fed-batch cultures of ΔmetB improved desulfurization efficiency up to 99.3% compared to batch mode, upon optimization of ethanol feeding rates. Thus, we identify carbon source as an important factor for process upscale, while dynamic control of nutrient supply may contribute to balancing biomass production and enzymatic activity. KEY POINTS: • Recombinant R. qingshengii IGTS8 cultivated under sulfur-repression in bioreactors. • Carbon supply limits growth and desulfurization activity in batch cultures. • Fed-batch ethanol control boosts longevity, biomass, and desulfurization activity.

Indexed as

BiomassBioreactorsRhodococcusSulfurBacterial ProteinsEthanolMethionineSulfatesThiophenesBacterial ProteinsdibenzothiopheneEthanolMethionineSulfatesSulfurThiophenes2-HydroxybiphenylBiodesulfurizationDibenzothiopheneGenetic engineeringMethionineStirred-tank bioreactorWhole-cell biocatalystΔmetB

Identifiers

PMID41942713
PMCPMC13056767

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.