Evidence map›Paper›PMID 41942444›Full record

ArticleNature communications2026

Genomic analysis of high pathogenicity avian influenza viruses from Antarctica reveals multiple introductions from South America.

Maria Ogrzewalska, Ralph Eric Thijl Vanstreels, Elisa Cavalcante Pereira, Emandi Campinas, Leonardo Correa Junior, Jennifer Oliveira Melo, Larissa Macedo, Luciana Reis Appolinario, Ighor Arantes, Martha Lima Brandao and 15 more

Abstract read
In one paragraph

Article in Nature communications, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

25 authors.

Maria OgrzewalskaLaboratory of Respiratory Viruses, Exanthematic, Enteroviruses and Viral Emergencies, Oswaldo Cruz Institute, Fiocruz Foundation, Rio de Janeiro, RJ, Brazil. maria.ogrzewalska@ioc.fiocruz.br.ORCID http://orcid.org/0000-0002-9207-743X
Ralph Eric Thijl VanstreelsKaren C. Drayer Wildlife Health Center, One Health Institute, School of Veterinary Medicine, University of California, Davis, CA, USA.
Elisa Cavalcante PereiraLaboratory of Respiratory Viruses, Exanthematic, Enteroviruses and Viral Emergencies, Oswaldo Cruz Institute, Fiocruz Foundation, Rio de Janeiro, RJ, Brazil.
Emandi CampinasLaboratory of Respiratory Viruses, Exanthematic, Enteroviruses and Viral Emergencies, Oswaldo Cruz Institute, Fiocruz Foundation, Rio de Janeiro, RJ, Brazil.
Leonardo Correa JuniorLaboratory of Respiratory Viruses, Exanthematic, Enteroviruses and Viral Emergencies, Oswaldo Cruz Institute, Fiocruz Foundation, Rio de Janeiro, RJ, Brazil.
Jennifer Oliveira MeloLaboratory of Respiratory Viruses, Exanthematic, Enteroviruses and Viral Emergencies, Oswaldo Cruz Institute, Fiocruz Foundation, Rio de Janeiro, RJ, Brazil.ORCID http://orcid.org/0009-0005-3529-3733
Larissa MacedoLaboratory of Respiratory Viruses, Exanthematic, Enteroviruses and Viral Emergencies, Oswaldo Cruz Institute, Fiocruz Foundation, Rio de Janeiro, RJ, Brazil.
Luciana Reis AppolinarioLaboratory of Respiratory Viruses, Exanthematic, Enteroviruses and Viral Emergencies, Oswaldo Cruz Institute, Fiocruz Foundation, Rio de Janeiro, RJ, Brazil.
Ighor ArantesLaboratory of Arboviruses and Hemorrhagic Viruses, Oswaldo Cruz Institute, Fiocruz Foundation, Rio de Janeiro, RJ, Brazil.
Martha Lima BrandaoVice-Presidency of Production and Innovation in Health, Fiocruz Foundation, Rio de Janeiro, RJ, Brazil.
Bruno Rocha PribulLaboratory of Bacteriology Applied to One Health and Antimicrobial Resistance, Fiocruz Foundation, Rio de Janeiro, RJ, Brazil.
Claudio Marcos RochaLaboratory of Bacteriology Applied to One Health and Antimicrobial Resistance, Fiocruz Foundation, Rio de Janeiro, RJ, Brazil.
Fabricio Souza CamposDepartment of Microbiology, Immunology and Parasitology, Institute of Basic Health Sciences, Federal University of Rio Grande do Sul, Porto Alegre, RS, Brazil.ORCID http://orcid.org/0000-0002-5948-472X
Ueric José Borges de SouzaBioinformatics and Biotechnology Laboratory, Campus of Gurupi, Federal University of Tocantins, Gurupi, Tocantins, Brazil.ORCID http://orcid.org/0000-0003-1442-4771
Bruna Paredes GalarzaDepartment of Microbiology, Immunology and Parasitology, Institute of Basic Health Sciences, Federal University of Rio Grande do Sul, Porto Alegre, RS, Brazil.ORCID http://orcid.org/0009-0008-1490-8710
Alanis Silva MelgarejoDepartment of Microbiology, Immunology and Parasitology, Institute of Basic Health Sciences, Federal University of Rio Grande do Sul, Porto Alegre, RS, Brazil.ORCID http://orcid.org/0000-0003-1696-099X
Luciana TrillesMycology Laboratory, National Institute of Infectious Diseases, Evandro Chagas, Fiocruz Foundation, Rio de Janeiro, RJ, Brazil.
Lucas Machado MoreiraVice-Presidency of Production and Innovation in Health, Fiocruz Foundation, Rio de Janeiro, RJ, Brazil.ORCID http://orcid.org/0000-0002-8084-7513
Wim DegraveLaboratory of Applied Genomics and Bioinnovations, Oswaldo Cruz Institute, Fiocruz Foundation, Rio de Janeiro, RJ, Brazil.ORCID http://orcid.org/0000-0003-3533-4580
Maithê Magalhães
Daniel MoreiraLaboratory of Applied Genomics and Bioinnovations, Oswaldo Cruz Institute, Fiocruz Foundation, Rio de Janeiro, RJ, Brazil.ORCID http://orcid.org/0000-0002-9434-9582
Roberto do Val VilelaLaboratory of Laboratory of Biology and Parasitology of Reservoir Wild Mammals, Oswaldo Cruz Institute, Fiocruz Foundation, Rio de Janeiro, RJ, Brazil.
Fernando Couto MottaLaboratory of Respiratory Viruses, Exanthematic, Enteroviruses and Viral Emergencies, Oswaldo Cruz Institute, Fiocruz Foundation, Rio de Janeiro, RJ, Brazil.
Marilda M SiqueiraLaboratory of Respiratory Viruses, Exanthematic, Enteroviruses and Viral Emergencies, Oswaldo Cruz Institute, Fiocruz Foundation, Rio de Janeiro, RJ, Brazil.
Paola Cristina ResendeLaboratory of Respiratory Viruses, Exanthematic, Enteroviruses and Viral Emergencies, Oswaldo Cruz Institute, Fiocruz Foundation, Rio de Janeiro, RJ, Brazil. paola@ioc.fiocruz.br.ORCID http://orcid.org/0000-0002-2884-3662

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The spread of high pathogenic avian influenza virus (HPAIV) H5N1 clade 2.3.4.4b into Antarctica poses a major threat to polar wildlife. We report the detection of H5N1 in carcasses of eight species during the 2023-2024 and 2024-2025 austral summers in the South Shetland Islands: Antarctic shag, Antarctic tern, kelp gull, pintado petrel, Antarctic petrel, skuas, Antarctic fur seal, and southern elephant seal. Whole-genome sequencing, mutational profiling, and phylogenetic reconstruction revealed that the viruses detected in these hosts descended from distinct introduction events. One group of strains including complete and partial viral genomes from a gull, skuas, fur seals, an Antarctic tern, and a southern elephant seal clustered with H5N1 strains previously detected in marine mammals in South America and formed a polyphyletic lineage consistent with at least two independent introductions into Antarctica. A second group of strains including complete and partial viral genomes from petrels, shags, and skuas clustered with H5N1 strains previously detected in seabirds and marine mammals in South Georgia and with a previously reported HPAIV detection from Torgersen Island, Antarctic Peninsula. These findings reveal extensive epidemiological connectivity between South America and Antarctica, with South Georgia serving as a "stepping stone" for virus spread in the region.

Indexed as

Genome, ViralInfluenza A Virus, H5N1 SubtypeInfluenza in BirdsOrthomyxoviridae InfectionsAnimalsAntarctic RegionsBirdsGenomicsPhylogenySouth AmericaWhole Genome Sequencing

Identifiers

PMID41942444
PMCPMC13234146

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.