Evidence map›Paper›PMID 41941098›Full record

ArticleInternational journal of computer assisted radiology and surgery2026

GeoTranMesh: a geometry-guided multi-branch mesh transformer for 3d liver segmentation.

Jiaming Feng, Xukun Zhang, Shahid Farid, Sharib Ali

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Article in International journal of computer assisted radiology and surgery, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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5 · Who and what money

Authors and funding

4 authors.

Jiaming FengAI in Medicine and Surgery Group, School of Computer Science, University of Leeds, LS2 9JT, Leeds, UK.
Xukun ZhangDepartment of Diagnostic Radiology, Li Ka Shing Faculty of Medicine, The University of Hong Kong, Pok Fu Lam, Hong Kong.
Shahid FaridDepartment of HPB and Transplant Surgery, St. James's University Hospital, Leeds, UK.
Sharib AliAI in Medicine and Surgery Group, School of Computer Science, University of Leeds, LS2 9JT, Leeds, UK. s.s.ali@leeds.ac.uk.ORCID http://orcid.org/0000-0003-1313-3542

Funding

Engineering and Physical Sciences Research Council UKRI914
6 · The paper itself

Abstract

purposeAnatomical landmarks on the liver surface, such as the falciform ligament and hepatic ridge, exhibit complex geometry and significant morphological variability. Accurate segmentation of these structures on 3D liver mesh is essential for intraoperative navigation. This paper presents GeoTranMesh, a geometry-guided multi-branch mesh Transformer that employs hierarchical encoding-decoding and global geometric modeling to achieve high-precision liver mesh segmentation.

methodsA hybrid attention mechanism is proposed to fuse local geometric features with cross-branch contextual information, while a directional multi-branch fusion module refines features along tangent, normal, and bitangent directions to enhance geometric consistency. In addition, geometry-guided multi-task supervision, including boundary, distance, and normal regression, is incorporated to strengthen morphological feature learning.

resultsOn liver mesh dataset, GeoTranMesh achieved the highest segmentation accuracy, with Dice scores of 30.9% and 66.4% for the falciform ligament and liver ridge, respectively, an overall Dice of 59.5%, and a Chamfer distance of only 4.4 mm, demonstrating superior geometric consistency and anatomical precision.

conclusionGeoTranMesh integrates hybrid attention and directional multi-branch fusion to enhance geometric consistency and morphological feature learning, achieving precise segmentation of complex anatomical landmarks, demonstrating potential for clinical and AR-guided liver surgery applications.

Indexed as

Anatomic LandmarksImaging, Three-DimensionalLiverSurgery, Computer-AssistedTomography, X-Ray ComputedAlgorithmsHumans3D landmark segmentationAR-guided surgeryLiver surfaceMesh transformer

Identifiers

PMID41941098
PMCPMC13354689

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.