Evidence map›Paper›PMID 41940951›Full record

ArticleBlood2026

The ASH HematOmics Program supports integrative analysis of genomic and clinical data in hematologic diseases.

Congyu Lu, Gavriel Y Matt, Robin Paul, Jian Wang, Edgar Sioson, Karishma Gangwani, Aleksandar Acić, Andrew Willems, Airen Zaldívar Peraza, Colleen Reilly and 13 more

Abstract read
In one paragraph

Article in Blood, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

23 authors.

Congyu LuDepartment of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN.ORCID 0000-0003-2651-6251
Gavriel Y MattDepartment of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN.
Robin PaulDepartment of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN.ORCID 0000-0003-3727-8025
Jian WangDepartment of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN.
Edgar SiosonDepartment of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN.ORCID 0000-0002-7540-8516
Karishma GangwaniDepartment of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN.ORCID 0000-0002-2986-4481
Aleksandar AcićDepartment of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN.ORCID 0009-0006-6113-9999
Andrew WillemsDepartment of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN.ORCID 0000-0002-7927-0745
Airen Zaldívar PerazaDepartment of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN.ORCID 0009-0008-3234-2925
Colleen ReillyDepartment of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN.ORCID 0000-0003-3119-9940
Petri PölönenDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, TN.ORCID 0000-0001-6128-9985
Qingsong GaoDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, TN.ORCID 0000-0002-9930-8499
Qian LiDepartment of Biostatistics, St. Jude Children's Research Hospital, Memphis, TN.ORCID 0000-0001-9874-3555
Stanley B PoundsDepartment of Biostatistics, St. Jude Children's Research Hospital, Memphis, TN.ORCID 0000-0002-9167-2114
Andy G X ZengPrincess Margaret Cancer Centre, University Health Network, Toronto, ON, Canada.
Sihan LiDepartment of Pharmacy and Pharmaceutical Sciences, St. Jude Children's Research Hospital, Memphis, TN.ORCID 0009-0005-6211-6847
Niroshan NadarajahMunich Leukemia Laboratory, Munich, Germany.
Samuel W BradyDepartment of Pharmacy and Pharmaceutical Sciences, St. Jude Children's Research Hospital, Memphis, TN.
Ilaria IacobucciDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, TN.ORCID 0000-0003-2008-1365
Torsten HaferlachMunich Leukemia Laboratory, Munich, Germany.
Miquella C RoseAmerican Society of Hematology, Washington, DC.ORCID 0000-0001-7780-171X
Charles G MullighanDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, TN.ORCID 0000-0002-1871-1850
Xin ZhouDepartment of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN.ORCID 0000-0003-3979-8200

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

abstractThe increasing availability of genomic and transcriptomic sequencing has uncovered diverse genomic alterations and distinct gene expression profiles driving hematologic diseases, yet a data integration and sharing platform dedicated to hematology remains lacking. We developed the American Society of Hematology (ASH) HematOmics Program (ASHOP; ashop.hematology.org), a resource for exploring somatic alterations and gene fusions, transcriptomic results, and clinical data from 5960 patients spanning B-cell precursor and T-cell acute lymphoblastic leukemia, acute myeloid leukemia, myelodysplastic syndromes, and chronic lymphocytic leukemia. Users can explore genomic alteration landscapes and comutation patterns via lollipop and matrix plots and analyze significantly altered genes in user-defined subcohorts. Transcriptomes can be explored through interactive uniform manifold approximation and projections, clustering, differential expression, and pathway enrichment. Genomic, transcriptomic features, and clinical outcomes can be correlated in a user-driven manner or combined to precisely define study cohorts. We illustrate the following 4 use cases of ASHOP: (1) stratification of DUX4-rearranged B-cell leukemias into Early/Multipotent and Committed subgroups with distinct outcomes, (2) characterization of HOXA/HOXB expression patterns in acute myeloid leukemias, (3) correlating mutational burden with mismatch repair deficiency and mutational signatures, and (4) investigation of TP53 alteration landscape. ASHOP is an open-access resource to inform genomic and transcriptomic data interpretation for hematologic malignancies and will expand to support additional diseases and data modalities from the ASH community.

Indexed as

GenomicsHematologic DiseasesGene Expression ProfilingHumansMultiomicsTranscriptome

Identifiers

PMID41940951
PMCPMC13468973

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.