Evidence map›Paper›PMID 41940667›Full record

ArticleApplied and environmental microbiology2026

From clinics to sewers: leveraging environmental surveillance and whole genome sequencing to inform transmission of ESBL-

Sheena Conforti, Louis du Plessis, Claudia Bagutti, Jens Becker, Silvio D Brugger, Alexia Cusini, Adrian Egli, Valeria Gaia, Gilbert Greub, Cornelia Guler and 13 more

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Applied and environmental microbiology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors.

Sheena ConfortiEawag, Swiss Federal Institute of Aquatic Science and Technology, Dübendorf, Switzerland.ORCID 0000-0002-0173-6170
Louis du PlessisDepartment of Biosystems Science and Engineering, ETH Zürich, Basel, Switzerland.ORCID 0000-0003-0352-6289
Claudia BaguttiState Laboratory Basel-Stadt, Basel, Switzerland.
Jens BeckerClinic for Ruminants, Vetsuisse-Faculty, University of Bern, Bern, Switzerland.
Silvio D BruggerDepartment of Infectious Diseases and Hospital Epidemiology, University Hospital Zurich, University of Zurich, Zurich, Switzerland.ORCID 0000-0001-9492-9088
Alexia CusiniDivision of Infectious Diseases, Cantonal Hospital of Grisons, Chur, Switzerland.
Adrian EgliInstitute of Medical Microbiology, University of Zurich, Zurich, Switzerland.ORCID 0000-0002-3564-8603
Valeria GaiaEnte Ospedaliero Cantonale Bellinzona, Bellinzona, Switzerland.
Gilbert GreubInstitute of Microbiology, Lausanne University Hospital (CHUV) & University of Lausanne (UNIL), Lausanne, Switzerland.ORCID 0000-0001-9529-3317
Cornelia GulerCentral Laboratory, Department of Microbiology, Cantonal Hostpital of Grisons, Chur, Switzerland.
Jana S HuismanMassachusetts Institute of Technology, Cambridge, Massachusetts, USA.ORCID 0000-0002-1782-8109
Claudine KocherInstitute for Infectious Diseases, University of Bern, Bern, Switzerland.
Roger D KouyosDepartment of Infectious Diseases and Hospital Epidemiology, University Hospital Zurich, University of Zurich, Zurich, Switzerland.ORCID 0000-0002-9220-8348
Karoline LeuzingerClinical Virology, University Hospital Basel, Basel, Switzerland.
Carola MaffioliDepartment of Microbiology, MCL-Dr Risch AG, Niederwangen, Switzerland.
Mara NeacșuDepartment of Biosystems Science and Engineering, ETH Zürich, Basel, Switzerland.
Oliver NolteInstitute of Medical Microbiology, University of Zurich, Zurich, Switzerland.ORCID 0000-0002-1761-0812
Alban RametteInstitute for Infectious Diseases, University of Bern, Bern, Switzerland.
Salome N SeiffertDivision of Human Microbiology, Center for Laboratory Medicine, St. Gallen, Switzerland.
Sarah Tschudin-SutterDivision of Infectious Diseases, University Hospital Basel, University Basel, Basel, Switzerland.ORCID 0000-0003-4875-5368
Jon Paulin ZumthorAmt für Lebensmittelsicherheit und Tiergesundheit (ALT), Chur, Switzerland.
Tanja StadlerDepartment of Biosystems Science and Engineering, ETH Zürich, Basel, Switzerland.ORCID 0000-0001-6431-535X
Timothy R JulianEawag, Swiss Federal Institute of Aquatic Science and Technology, Dübendorf, Switzerland.ORCID 0000-0003-1000-0306

Funding

Bundesamt für GesundheitSwiss National Science Foundation 192763Swiss National Science Foundation 205933
6 · The paper itself

Abstract

Extended-spectrum β-lactamase-producing IMPORTANCE: Extended-spectrum β-lactamase-producing

Indexed as

Escherichia coliEscherichia coli InfectionsSewageWastewaterAnimalsAnti-Bacterial Agentsbeta-LactamasesCattleEnvironmental MonitoringGenome, BacterialHumansPhylogenySwitzerlandWhole Genome SequencingAnti-Bacterial Agentsbeta-LactamasesSewageWastewaterantimicrobial resistanceESBL-E. coliOne Healthphylogeneticssequencingwastewater-based surveillance

Identifiers

PMID41940667
PMCPMC13188883

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.