Evidence map›Paper›PMID 41932865›Full record

ArticleNature communications2026

Genomic analysis of T Cell receptors reveals lynch syndrome specific immune signatures.

Nan Deng, Fahriye Duzagac, Ana M Bolivar, Laura Reyes-Uribe, Melissa W Taggart, Selvi Thirumurthi, Luigi Ricciardiello, Patrick M Lynch, Y Nancy You, Scott Kopetz and 9 more

Abstract read
In one paragraph

Article in Nature communications, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

Nan Deng *Department of Clinical Cancer Prevention, The University of Texas MD Anderson Cancer Center, Houston, TX, USA.
Fahriye Duzagac *Department of Clinical Cancer Prevention, The University of Texas MD Anderson Cancer Center, Houston, TX, USA.ORCID http://orcid.org/0000-0002-4130-2246
Ana M Bolivar *Department of Clinical Cancer Prevention, The University of Texas MD Anderson Cancer Center, Houston, TX, USA.
Laura Reyes-UribeDepartment of Clinical Cancer Prevention, The University of Texas MD Anderson Cancer Center, Houston, TX, USA.
Melissa W TaggartDepartment of Pathology, The University of Texas MD Anderson Cancer Center, Houston, TX, USA.
Selvi ThirumurthiDepartment of Gastroenterology, Hepatology and Nutrition, The University of Texas MD Anderson Cancer Center, Houston, TX, USA.
Luigi RicciardielloDepartment of Gastroenterology, Hepatology and Nutrition, The University of Texas MD Anderson Cancer Center, Houston, TX, USA.
Patrick M LynchDepartment of Gastroenterology, Hepatology and Nutrition, The University of Texas MD Anderson Cancer Center, Houston, TX, USA.
Y Nancy YouDepartment of Colorectal Surgery, The University of Texas MD Anderson Cancer Center, Houston, TX, USA.ORCID http://orcid.org/0000-0002-5294-288X
Scott KopetzDepartment of GI Medical Oncology, The University of Texas MD Anderson Cancer Center, Houston, TX, USA.ORCID http://orcid.org/0000-0001-9647-3416
Paul ScheetDepartment of Epidemiology, The University of Texas MD Anderson Cancer Center, Houston, TX, USA.ORCID http://orcid.org/0000-0002-5173-7497
Gregory A LizeeDepartment of Melanoma Medical Oncology, The University of Texas MD Anderson Cancer Center, Houston, TX, USA.ORCID http://orcid.org/0000-0003-4449-7461
Alexandre ReubenDepartment of Thoracic/Head and Neck Medical Oncology, The University of Texas MD Anderson Cancer Center, Houston, TX, USA.ORCID http://orcid.org/0000-0003-4510-0382
Fatima MarinDepartment of Hereditary Cancer Program, Catalan Institute of Oncology - ICO, Hereditary Cancer Group, ONCOBELL Program, Institut d'Investigació Biomèdica de Bellvitge - IDIBELL, Ciber Oncología (CIBERONC) - Instituto de Salud Carlos III, L'Hospitalet de Llobregat, Barcelona, Spain.
Marta PinedaDepartment of Hereditary Cancer Program, Catalan Institute of Oncology - ICO, Hereditary Cancer Group, ONCOBELL Program, Institut d'Investigació Biomèdica de Bellvitge - IDIBELL, Ciber Oncología (CIBERONC) - Instituto de Salud Carlos III, L'Hospitalet de Llobregat, Barcelona, Spain.ORCID http://orcid.org/0000-0002-5403-5845
Krishna M SinhaDepartment of Clinical Cancer Prevention, The University of Texas MD Anderson Cancer Center, Houston, TX, USA.
Ajay BansalDivision of Gastroenterology and Hepatology, The University of Kansas Medical Center, Kansas City, KS, USA.
Gabriel CapellaDepartment of Hereditary Cancer Program, Catalan Institute of Oncology - ICO, Hereditary Cancer Group, ONCOBELL Program, Institut d'Investigació Biomèdica de Bellvitge - IDIBELL, Ciber Oncología (CIBERONC) - Instituto de Salud Carlos III, L'Hospitalet de Llobregat, Barcelona, Spain.
Eduardo VilarDepartment of Clinical Cancer Prevention, The University of Texas MD Anderson Cancer Center, Houston, TX, USA. EVilar@mdanderson.org.ORCID http://orcid.org/0000-0001-6404-3761

Funding

Cancer Immune-Interception for Lynch SyndromeR01CA257375 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI LIPKIN, STEVEN M, VILAR SANCHEZ, EDUARDO · 2021 to 2025
$3.3M
Cancer Immune-Interception in a Spontaneous Non-Human Primate Model of Lynch SyndromeR01CA260761 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI STANTON BRADLEY GRAY, Eduardo Vilar Sanchez · 2022 to 2026
$3.3M
Cancer Prevention and Research Institute of Texas (Cancer Prevention Research Institute of Texas) RP170259U.S. Department of Health & Human Services | National Institutes of Health (NIH) CA217789U.S. Department of Health & Human Services | NIH | National Cancer Institute (NCI) R01CA257375U.S. Department of Health & Human Services | NIH | National Cancer Institute (NCI) R01CA260761
6 · The paper itself

Abstract

Lynch Syndrome (LS) provides the perfect context to understand DNA mismatch repair deficient carcinogenesis, which is characterized by neoplastic lesions with high rates of shared neoantigens eliciting adaptive immunity through T cell receptor (TCR) recognition. However, the TCR landscape in LS carriers remains unexplored. Here, we perform TCR sequencing of 277 blood samples from LS cancer survivors, previvors, and controls, as well as matching colorectal cancers and pre-cancers. We show that up to 41% of the most expanded TCRβs from colorectal neoplasms are detectable in the blood of LS carriers, while showing minimal expansion in controls. In addition, we develop and validate a classification model that distinguishes LS carriers from controls using circulating TCRβs signatures associated with LS independent of thecancer history and with cancer-free LS previvors. Together, our findings characterize circulating and tissue TCRβs associated with LS, thus representing a step toward identifying blood-based TCR biomarkers for immune surveillance.

Indexed as

Colorectal Neoplasms, Hereditary NonpolyposisReceptors, Antigen, T-CellReceptors, Antigen, T-Cell, alpha-betaColorectal NeoplasmsFemaleGenomicsHumansMaleReceptors, Antigen, T-CellReceptors, Antigen, T-Cell, alpha-beta

Identifiers

PMID41932865
PMCPMC13219734

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.