Evidence map›Paper›PMID 41928925›Full record

ArticlebioRxiv : the preprint server for biology2026

Processing of Reversed Replication Forks is Required for the Resolution of Replication-Transcription Conflicts.

Juan Carvajal-Garcia, Houra Merrikh

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

2 authors.

Juan Carvajal-GarciaDepartment of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN 37232, USA.ORCID 0000-0001-7257-3674
Houra MerrikhDepartment of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN 37232, USA.ORCID 0000-0001-9956-9640

Funding

The role of error-prone polymerases in mutagenesis and evolutionK99ES037493 · NIEHS · VANDERBILT UNIVERSITY · PI CARVAJAL GARCIA, JUAN · 2025 to 2025
$123k
NIEHS NIH HHS K99 ES037493
6 · The paper itself

Abstract

DNA replication and transcription occur simultaneously on the same template, leading to conflicts between the two machineries. Conflicts stall replication forks, lead to genome instability, mutagenesis, and the formation of deleterious R-loop structures. There are two types of conflicts: depending on the strand where a gene is encoded, the two machineries either meet head-on or co-directionally. The adverse outcomes of conflicts in the head-on orientation are significantly more detrimental to cells compared to co-directional conflicts. Despite many studies across various organisms, how the replication fork structure is impacted by these encounters remains unclear. Here, we performed an unbiased genetic screen using a transposon library to identify factors essential for surviving head-on conflicts in

Identifiers

PMID41928925
PMCPMC13041938

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.