Evidence map›Paper›PMID 41928511›Full record

ArticleCell chemical biology2026

Assessing the suitability of deubiquitylases as substrates for targeted protein degradation.

Joel Tong, J Monty Watkins, James M Burke, Thomas Kodadek

Abstract read
In one paragraph

Article in Cell chemical biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors.

Joel TongDepartment of Chemistry, The Herbert Wertheim UF Scripps Institute for Biomedical Innovation & Technology, Jupiter, FL 33458, USA; Skaggs Graduate School of Chemical and Biological Sciences, Jupiter, FL 33458, USA.
J Monty WatkinsDepartment of Molecular Medicine, The Herbert Wertheim UF Scripps Institute for Biomedical Innovation & Technology, Jupiter, FL 33458, USA; Skaggs Graduate School of Chemical and Biological Sciences, Jupiter, FL 33458, USA.
James M BurkeDepartment of Molecular Medicine, The Herbert Wertheim UF Scripps Institute for Biomedical Innovation & Technology, Jupiter, FL 33458, USA; Skaggs Graduate School of Chemical and Biological Sciences, Jupiter, FL 33458, USA.
Thomas KodadekDepartment of Chemistry, The Herbert Wertheim UF Scripps Institute for Biomedical Innovation & Technology, Jupiter, FL 33458, USA; Skaggs Graduate School of Chemical and Biological Sciences, Jupiter, FL 33458, USA. Electronic address: kodadek@ufl.edu.

Funding

Development of Ubiquitin-Independent DegradersR01CA290247 · NCI · UNIVERSITY OF FLORIDA · PI Thomas J. Kodadek · 2023 to 2026
$3.3M
Vanquish Neo UHPLC for The Wertheim UF Scripps InstituteS10OD036363 · OD · UNIVERSITY OF FLORIDA · PI TSAPRAILIS, GEORGE · 2024 to 2024
$93k
NCI NIH HHS R01 CA290247NIH HHS S10 OD036363
6 · The paper itself

Abstract

The development of selective inhibitors of deubiquitylase enzymes (DUBs) is difficult due to a high level of homology in the active sites of the ≈100 such enzymes in the human proteome. A potential way to achieve this in a more facile manner would be to develop proteolysis-targeting chimera (PROTAC) or molecular glues that engage the target DUB in a less conserved region outside of the catalytic domain. However, this raises the concern that auto-deubiquitylation would make DUBs poor substrates for this modality. Here, we describe a chemical genetics system to evaluate this issue. We find that some DUBs are readily degradable via the Ubiquitin-proteasome pathway, and some are not. Of the latter category, some resist turnover through auto-deubiquitylation, and some are simply poor proteasome substrates.

Indexed as

Deubiquitinating EnzymesHumansProteasome Endopeptidase ComplexProteolysisProteolysis Targeting ChimeraSubstrate SpecificityUbiquitinUbiquitinationDeubiquitinating EnzymesProteasome Endopeptidase ComplexProteolysis Targeting ChimeraUbiquitindegradationdeubiquitylasePROTACtargeted protein

Identifiers

PMID41928511
PMCPMC13495413

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.