ArticleScientific data2026
Telomere-to-telomere gapless genome assembly of Siniperca scherzeri.
Article in Scientific data, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
0 citing papers in PubMed.
No citing paper in PubMed yet.
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
9 authors.
Funding
Abstract
The mandarin fish (Siniperca scherzeri), renowned as the "freshwater grouper", has emerged as a commercially significant aquaculture species in China due to its superior flesh quality, disease resistance, and domestication adaptability. With the rapid development of bioinformatics, higher standards of genome analysis are now required compared to previous reference genomes. In this study, we integrated PacBio HiFi long-read sequencing, Oxford Nanopore Technologies ultralong-read sequencing, and Hi-C chromatin conformation capture to assemble a near-complete telomere-to-telomere genome. The gapless assembly spans 24 chromosomes, with telomeric repeats detected at both ends of 20 chromosomes and at only one end of the remaining four chromosomes. BUSCO evaluation against the Actinopterygii database (actinopterygii_odb10) revealed 98.7% genome completeness. Alignment analyses using minimap2 demonstrated >97% mapping rates for ONT ultralong reads, PacBio HiFi reads, and Hi-C data against the assembled genome. We annotated 23,296 protein-coding genes, establishing a crucial genomic resource for elucidating the species' evolutionary biology and advancing molecular breeding strategies.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.