Evidence map›Paper›PMID 41926541›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2026

Functional role of small extrachromosomal circular DNA in colorectal cancer.

Judith Mary Hariprakash, Egija Zole, Weijia Feng, Dan Hao, Lasse Bøllehuus Hansen, Nirmalya Bandyopadhyay, Marghoob Mohiyuddin, Sihan Wu, Astrid Zedlitz Johansen, Julia Sidenius Johansen and 1 more

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Judith Mary Hariprakash *Ecology and Evolution, Department of Biology, University of Copenhagen, Copenhagen 2100, Denmark.ORCID 0000-0002-1164-347X
Egija Zole *Ecology and Evolution, Department of Biology, University of Copenhagen, Copenhagen 2100, Denmark.
Weijia FengEcology and Evolution, Department of Biology, University of Copenhagen, Copenhagen 2100, Denmark.ORCID 0000-0003-4519-6441
Dan HaoEcology and Evolution, Department of Biology, University of Copenhagen, Copenhagen 2100, Denmark.ORCID 0000-0002-9023-0488
Lasse Bøllehuus HansenEcology and Evolution, Department of Biology, University of Copenhagen, Copenhagen 2100, Denmark.
Nirmalya BandyopadhyayBioinformatics Research & Early Development, Roche Diagnostics, Santa Clara, CA 95050.
Marghoob MohiyuddinBioinformatics Research & Early Development, Roche Diagnostics, Santa Clara, CA 95050.
Sihan WuChildren's Medical Center Research Institute, University of Texas Southwestern Medical Center, Dallas, TX 75235.
Astrid Zedlitz JohansenDepartment of Pathology, Copenhagen University Hospital-Herlev and Gentofte, Herlev 2730, Denmark.ORCID 0000-0002-4948-6799
Julia Sidenius JohansenDepartment of Oncology, Copenhagen University Hospital-Herlev and Gentofte, Herlev 2730, Denmark.
Birgitte RegenbergEcology and Evolution, Department of Biology, University of Copenhagen, Copenhagen 2100, Denmark.ORCID 0000-0003-4996-7012

Funding

China Scholarship Council (CSC) NAEC | HORIZON EUROPE Framework Programme (Horizon Europe) 899417
6 · The paper itself

Abstract

Extrachromosomal circular DNA (eccDNA) are molecules that originate from chromosomal DNA but exist independently. While large eccDNA (ecDNA) contributes to tumorigenesis, the role of smaller eccDNA (<100,000 base pairs) in cancer remains unclear. Our analysis of 25 colorectal cancer (CRC) tumors and normal adjacent tissues revealed that eccDNA is significantly more abundant in tumor tissues, correlating strongly with chromosomal amplifications. The presence of whole intact genes on 1.29% of eccDNA was nonrandom. We identified 84 genes that recurred across tumors of multiple patients when present on eccDNA, with 19% of genes being cancer-associated. eccDNA-borne genes were often accompanied by increased expression, and their contribution to expression was much larger than that from linear amplifications and the larger ecDNA. The cytokine gene

Indexed as

Colorectal NeoplasmsDNA, CircularCell Line, TumorChemokine CXCL5Extrachromosomal DNAGene Expression Regulation, NeoplasticHumansChemokine CXCL5CXCL5 protein, humanDNA, CircularExtrachromosomal DNAchromatin biologychromosomal amplificationcircular DNAcolorectal canceroncogene

Identifiers

PMID41926541
PMCPMC13056112

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.