Evidence map›Paper›PMID 41924326›Full record

ArticleTransactions on machine learning research2025

Bayesian Neighborhood Adaptation for Graph Neural Networks.

Paribesh Regmi, Rui Li, Kishan Kc

Abstract read
In one paragraph

Article in Transactions on machine learning research, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Paribesh RegmiGolisano College of Computing and Information Science Rochester Institute of Technology.
Rui LiGolisano College of Computing and Information Science Rochester Institute of Technology.
Kishan KcAmazon.com, Inc.

Funding

Large-scale Disease Pathway Discovery by Integrating Tissue-specific Molecular Networks via Hierarchical Bayesian Inference on Graph Neural NetworksR35GM156653 · NIGMS · ROCHESTER INSTITUTE OF TECHNOLOGY · PI RUI LI · 2025 to 2026
$733k
NIGMS NIH HHS R35 GM156653
6 · The paper itself

Abstract

The neighborhood scope (i.e., number of hops) where graph neural networks (GNNs) aggregate information to characterize a node's statistical property is critical to GNNs' performance. Two-stage approaches, training and validating GNNs for every pre-specified neighborhood scope to search for the best setting, is a time-consuming task and tends to be biased due to the search space design. How to adaptively determine proper neighborhood scopes for the aggregation process for both homophilic and heterophilic graphs remains largely unexplored. We thus propose to model the GNNs' message-passing behavior on a graph as a stochastic process by treating the number of hops as a beta process. This Bayesian framework allows us to infer the most plausible neighborhood scope for message aggregation simultaneously with the optimization of GNN parameters. Our theoretical analysis shows that the scope inference improves the expressivity of a GNN. Experiments on benchmark homophilic and heterophilic datasets show that the proposed method is compatible with state-of-the-art GNN variants, achieving competitive or superior performance on the node classification task, and providing well-calibrated predictions.

Identifiers

PMID41924326
PMCPMC13038280

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.