Evidence map›Paper›PMID 41918124›Full record

ArticleGenome biology2026

The pan-genome provides insights into evolutionary dynamics and fatty acid metabolism in Aceraceae family.

Qiuyue Ma, Shushun Li, Zhongping Xu, Lu Zhu, Tianchao Wang, Kunyuan Yan, Yiming Du, Shuxian Li, Libing Wang, Jie Ren and 7 more

Abstract read
In one paragraph

Article in Genome biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Structural Variation and Its Roles in Plant Genomes.Plants (Basel, Switzerland) · 2026
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Qiuyue MaInstitute of Leisure Agriculture, Jiangsu Academy of Agricultural Sciences, Nanjing, 210014, China.
Shushun LiInstitute of Leisure Agriculture, Jiangsu Academy of Agricultural Sciences, Nanjing, 210014, China.
Zhongping XuHubei Hongshan Laboratory, National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, 430070, China.
Lu ZhuInstitute of Leisure Agriculture, Jiangsu Academy of Agricultural Sciences, Nanjing, 210014, China.
Tianchao WangThe Institute of Biotechnology Research, Beijing Academy of Agriculture and Forestry Sciences, Beijing, China.
Kunyuan YanInstitute of Leisure Agriculture, Jiangsu Academy of Agricultural Sciences, Nanjing, 210014, China.
Yiming DuInstitute of Leisure Agriculture, Jiangsu Academy of Agricultural Sciences, Nanjing, 210014, China.
Shuxian LiNanjing Forestry University, Nanjing, 210037, China.
Libing WangNorthwest A&F University, Xianyang, 712199, China.
Jie RenInstitute of Agricultural Engineering, Anhui Academy of Agricultural Sciences, Anhui, 230031, China.
Yuxiao WangNanjing Forestry University, Nanjing, 210037, China.
Xuejie SunNanjing Forestry University, Nanjing, 210037, China.
Zhu ChenInstitute of Agricultural Engineering, Anhui Academy of Agricultural Sciences, Anhui, 230031, China.
Zhiyong ZhuNingbo City College of Vocational Technology, Ningbo, 315100, China.
Fei ShenThe Institute of Biotechnology Research, Beijing Academy of Agriculture and Forestry Sciences, Beijing, China. shenf1028@gmail.com.
Qianzhong LiInstitute of Leisure Agriculture, Jiangsu Academy of Agricultural Sciences, Nanjing, 210014, China. qianzhongli@jaas.ac.cn.
Shuangxia JinHubei Hongshan Laboratory, National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, 430070, China. jsx@mail.hzau.edu.cn.

Funding

The National Key Research and Development Program 2022YFD2200401The Natural Science Foundation of China 32471929
6 · The paper itself

Abstract

backgroundThe Aceraceae family has ecological, ornamental and economical importance in plants. However, the genetic variations, evolution, and domestication of Aceraceae species are not well understood. Pan-genomes provide a framework for capturing genetic diversity across a genus and for a comprehensive understanding of genomic variation during evolution.

resultsHere, we construct a graph-based pan-genome from 13 Aceraceae species, revealing evolutionary dynamics driven by long-terminal repeat retrotransposons. Sequencing of 134 cultivated Acer palmatum accessions identifies 2,160 single nucleotide polymorphisms associated with 10 fatty acid traits through genome wide association study. We further characterize 1,064,183 structural variation loci impacting fatty acid accumulation. By multi-omics analysis, we also identify ActKCS as a key candidate gene required for nervonic acid biosynthesis. Transgenic overexpression of ActKCS in Arabidopsis thaliana and Brassica napus enhances seed nervonic acid content, with increases ranging from 0.05% to 0.12% and 0.25% to 1.05%, respectively. We find that the transcription factor ActMYB95 directly regulates ActKCS. These findings decipher the genetic architecture underlying fatty acid synthesis and enable sustainable production of high value nervonic acid rich oils for neurological therapeutics and bio industrial applications.

conclusionsThis study provides insights into the genetic and molecular mechanisms that underpin fatty acid biosynthesis. The resources and findings will accelerate the utilization and improvement of Aceraceae genetic diversity.

Indexed as

Evolution, MolecularFatty AcidsGenome, PlantAcerFatty Acids, MonounsaturatedGenome-Wide Association StudyPlant ProteinsPolymorphism, Single NucleotideFatty AcidsFatty Acids, Monounsaturatednervonic acidPlant ProteinsAceraceaeEvolutionFatty acidNervonic acid (NA)Pangenome

Identifiers

PMID41918124
PMCPMC13159215

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LicenceCC BY-NC-ND
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.