Evidence map›Paper›PMID 41911447›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2026

Regulation of STK38 by autophagy governs YAP1 activity during paligenosis.

Yongji Zeng, Yang-Zhe Huang, Qing Kay Li, Raymond Ho, Steven J Bark, Spencer G Willet, Richard J DiPaolo, Jason C Mills

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Yongji ZengSection of Gastroenterology and Hepatology, Department of Medicine, Baylor College of Medicine, Houston, TX 77030.
Yang-Zhe HuangSection of Gastroenterology and Hepatology, Department of Medicine, Baylor College of Medicine, Houston, TX 77030.
Qing Kay LiDepartment of Pathology, Johns Hopkins Medical Institutions, Baltimore, MD 21287.
Raymond HoSection of Gastroenterology and Hepatology, Department of Medicine, Baylor College of Medicine, Houston, TX 77030.ORCID 0000-0002-6043-4287
Steven J BarkSection of Gastroenterology and Hepatology, Department of Medicine, Baylor College of Medicine, Houston, TX 77030.
Spencer G WilletDepartment of Developmental Biology, Washington University School of Medicine, St. Louis, MO 63110.
Richard J DiPaoloDepartment of Molecular Microbiology and Immunology, Saint Louis University School of Medicine, Saint Louis, MO 63104.
Jason C MillsSection of Gastroenterology and Hepatology, Department of Medicine, Baylor College of Medicine, Houston, TX 77030.ORCID 0000-0002-0402-4662

Funding

Tumor BiologyP30CA125123 · NCI · BAYLOR COLLEGE OF MEDICINE · PI Suzanne AW Fuqua · 2007 to 2026
$73.9M
Tissue Analysis & Molecular Imaging CoreP30DK056338 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI Hashem B El-Serag · 2001 to 2026
$28.3M
Translational Research Support CoreP30ES030285 · NIEHS · BAYLOR COLLEGE OF MEDICINE · PI Cheryl L. Walker · 2019 to 2026
$14.7M
Preclinical and Clincial OutcomesP50HD103555 · NICHD · BAYLOR COLLEGE OF MEDICINE · PI Sandesh Chakravarthy Sreenath Nagamani, David Loren Nelson · 2020 to 2026
$9.9M
REGULATION OF ATROPHY-INDUCED PROGENITOR CELLS IN THE GASTRIC CORPUSR01DK094989 · NIDDK · WASHINGTON UNIVERSITY · PI Jason C Mills · 2012 to 2026
$6.1M
MECHANISMS OF CHIEF CELL DEDIFFERENTIATIONR01DK105129 · NIDDK · WASHINGTON UNIVERSITY · PI Jason C Mills · 2015 to 2026
$5.4M
Mechanisms Governing Expansion of Embryonic Progenitor Cells (EPCs) inMetaplasiaR01CA239645 · NCI · WASHINGTON UNIVERSITY · PI MILLS, JASON C · 2020 to 2024
$2.1M
The Role of Inflammation in Regulating Gastric MetaplasiaR01DK134531 · NIDDK · SAINT LOUIS UNIVERSITY · PI Richard J DiPaolo · 2023 to 2026
$2.1M
Developmental Reprogramming of Prostate Carcinogenesis by BPARC2ES018789 · NIEHS · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI HO, SHUK-MEI, MANCINI, MICHAEL A. · 2009 to 2010
$1.9M
THERMO SCIENTIFIC Q EXACTIVE HF-X HYBRID QUADRUPOLE-ORBITRAP MASS SPECTROMETERS10OD026804 · OD · BAYLOR COLLEGE OF MEDICINE · PI MALOVANNAYA, ANNA · 2019 to 2019
$717k
HIGH THROUGHPUT NGS SEQUENCER AT THE BCM GENOMIC AND RNA PROFILING CORES10OD036427 · OD · BAYLOR COLLEGE OF MEDICINE · PI KRAUSHAAR, DANIEL · 2024 to 2024
$600k
HHS | NIH | National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK) R01DK094989HHS | NIH | National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK) R01DK105129HHS | NIH | NIDDK | Division of Diabetes, Endocrinology, and Metabolic Diseases (DEM) R01DK134531National Cancer Center (NCC) National Cancer Center Postdoctoral FellowshipNCI NIH HHS P30 CA125123NCI NIH HHS R01 CA239645NICHD NIH HHS P50 HD103555NIDDK NIH HHS P30 DK056338NIDDK NIH HHS R01 DK094989NIDDK NIH HHS R01 DK105129NIDDK NIH HHS R01 DK134531NIEHS NIH HHS P30 ES030285NIEHS NIH HHS RC2 ES018789NIH HHS S10 OD026804NIH HHS S10 OD036427
6 · The paper itself

Abstract

Paligenosis is a conserved cellular plasticity program that allows mature cells to reenter the cell cycle in response to tissue injury. Paligenosis progresses via three stages: autodegradation (with dramatic increase in autophagy and lysosomes), induction of metaplastic or fetal-like genes, and cell cycle entry. Hippo signaling, particularly the downstream effector YAP1, regulates cellular plasticity, but its role in paligenosis has not been studied. Here, we examine YAP1 dynamics during paligenosis in digestive-enzyme-secreting chief cells from the mouse stomach. We identified Serine/Threonine Kinase 38 (STK38) as a noncanonical YAP1 kinase that phosphorylates and deactivates YAP1 in uninjured chief cells. During paligenosis, STK38 was degraded by autophagy in stage 1, dephosphorylating and activating YAP1. YAP1 activation was necessary and sufficient for paligenosis-driven conversion of chief cells into metaplastic, proliferating progenitors. Additionally, we show that STK38, like canonical Hippo kinases, interacts with Neurofibromatosis Type 2 (Merlin), a scaffold that recruits Hippo kinases to phosphorylate YAP1. We also observed the same pattern of YAP1 induction via autophagic destruction of STK38 in other tissues and cell types, suggesting injury-induced activation of autophagy in differentiated cells during tissue damage may be a more general feature by which Hippo effectors induce plasticity for regeneration.

Indexed as

Adaptor Proteins, Signal TransducingAutophagyCell PlasticityPhosphoproteinsProtein Serine-Threonine KinasesAnimalsCell Cycle ProteinsHumansMicePhosphorylationSignal TransductionTranscription FactorsYAP-Signaling ProteinsAdaptor Proteins, Signal TransducingCell Cycle ProteinsPhosphoproteinsProtein Serine-Threonine KinasesTranscription FactorsYap1 protein, mouseYAP-Signaling ProteinsHippo pathwayredifferentiationreprogramming

Identifiers

PMID41911447
PMCPMC13056135

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.