Evidence map›Paper›PMID 41910370›Full record

ArticleJournal of medical virology2026

Evaluation and Clinical Validation of Pan-Specific and Clade-Specific Diagnostic Real-Time PCR Assays for Monkeypox Virus.

Hong Chang, Tin Hang Hung, Binbin Li, Bobby Lim-Ho Kong, Ashwathi Asha Madhaven, Yue Wang, Ming-Shan Tsai, Dan Deng, Zhanfeng Cui

Abstract readEvaluation StudyValidation Study
In one paragraph

Article in Journal of medical virology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Hong ChangOxford Suzhou Centre for Advanced Research (OSCAR), University of Oxford, Suzhou, Jiangsu, China.
Tin Hang HungDepartment of Biology, University of Oxford, Oxford, Oxfordshire, UK.ORCID https://orcid.org/0000-0001-9853-2053
Binbin LiOxford Suzhou Centre for Advanced Research (OSCAR), University of Oxford, Suzhou, Jiangsu, China.
Bobby Lim-Ho KongZYTCA Limited, Centre for Innovation and Enterprise, Begbroke, Oxfordshire, UK.ORCID https://orcid.org/0000-0001-9626-3128
Ashwathi Asha MadhavenZYTCA Limited, Centre for Innovation and Enterprise, Begbroke, Oxfordshire, UK.
Yue WangOxford Suzhou Centre for Advanced Research (OSCAR), University of Oxford, Suzhou, Jiangsu, China.
Ming-Shan TsaiZYTCA Limited, Centre for Innovation and Enterprise, Begbroke, Oxfordshire, UK.ORCID https://orcid.org/0000-0001-6804-1317
Dan DengDepartment of Dermatology, Shanghai Children's Medical Center, School of Medicine, Shanghai Jiao Tong University, Shanghai, China.ORCID https://orcid.org/0000-0001-7317-283X
Zhanfeng CuiOxford Suzhou Centre for Advanced Research (OSCAR), University of Oxford, Suzhou, Jiangsu, China.

Funding

National Natural Science Foundation of China 82173396OSCAR ITC for Advanced Molecular Diagnostics YZCXPT2022204
6 · The paper itself

Abstract

Human mpox, formerly known as monkeypox, has twice been declared a Public Health Emergency of International Concern (PHEIC) by the World Health Organization, in 2022 and 2024. Despite this, global access to rapid, reliable diagnostics remains limited, hindering outbreak control and equitable clinical response. To address this gap, we developed and validated a rapid direct real-time PCR assay capable of detecting and differentiating Clade I and Clade II monkeypox virus (MPXV) directly from clinical samples. We designed a new pan-specific B15L assay to complement the published F3L assay and introduced the first clade-specific assay targeting the B1R gene of Clade I MPXV. In silico validation showed that both B15L and F3L assays detected all available MPXV genomes with 100% sensitivity, while B1R selectively detected only Clade I genomes with 100% specificity. Cross-reactivity screening against 40 high-priority non-target organisms revealed minimal risk of false positives. We confirmed analytical sensitivity of 2 copies per reaction for all assays in vitro, with clade-specific B1R showing 100% specificity. When adapted into a lyophilized direct PCR format for near-point-of-care use, the assay demonstrated detection down to 1 copy per reaction for pan-specific targets and 2 copies for clade-specific detection in spiked clinical samples. This direct PCR assay delivers accurate results in under 1 h without requiring nucleic acid extraction. Our combined genomic, laboratory, and clinical validations demonstrate exceptional sensitivity and specificity, positioning this assay as a highly promising tool in emergency mpox diagnostics and a potential model for future outbreak-responsive testing platforms.

Indexed as

Molecular Diagnostic TechniquesMonkeypox virusMpox, MonkeypoxReal-Time Polymerase Chain ReactionHumansSensitivity and Specificity

Identifiers

PMID41910370
PMCPMC13034724

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.