Evidence map›Paper›PMID 41909953›Full record

ArticleNucleic acids research2026

B-type lamins maintain transcriptional homeostasis by spatially controlling chromatin-speckle proximity.

Geun-Seup Shin, Jinho Kim, Ji-Young Kim, Chul-Hong Kim, Mi-Jin An, Hyun-Min Lee, Ah-Ra Jo, Yuna Park, Yujeong Hwangbo, Tae Kyung Hong and 3 more

Abstract read
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Article in Nucleic acids research, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

13 authors.

Geun-Seup ShinDepartment of Life Science, Chung-Ang University, Seoul 06974, Republic of Korea.
Jinho KimDepartment of Life Science, Chung-Ang University, Seoul 06974, Republic of Korea.
Ji-Young KimDepartment of Life Science, Chung-Ang University, Seoul 06974, Republic of Korea.
Chul-Hong KimDepartment of Life Science, Chung-Ang University, Seoul 06974, Republic of Korea.
Mi-Jin AnDepartment of Life Science, Chung-Ang University, Seoul 06974, Republic of Korea.
Hyun-Min LeeDepartment of Life Science, Chung-Ang University, Seoul 06974, Republic of Korea.
Ah-Ra JoDepartment of Life Science, Chung-Ang University, Seoul 06974, Republic of Korea.
Yuna ParkDepartment of Life Science, Chung-Ang University, Seoul 06974, Republic of Korea.
Yujeong HwangboDepartment of Life Science, Chung-Ang University, Seoul 06974, Republic of Korea.
Tae Kyung HongDepartment of Life Science, Chung-Ang University, Seoul 06974, Republic of Korea.
Youn-Sang JungDepartment of Life Science, Chung-Ang University, Seoul 06974, Republic of Korea.
Sangmyung RheeDepartment of Life Science, Chung-Ang University, Seoul 06974, Republic of Korea.
Jung-Woong KimDepartment of Life Science, Chung-Ang University, Seoul 06974, Republic of Korea.ORCID 0000-0003-4458-7213

Funding

Korea Environment Industry & Technology Institute RS-2025-02214027Korea government NRF-2023R1A2C1007657Korea government NRF-RS-2023-00220089Korea Ministry of EnvironmentNational Research Foundation of Korea
6 · The paper itself

Abstract

B-type lamins are essential nuclear scaffold proteins known to maintain peripheral heterochromatin through lamina-associated domains (LADs). Here, we identify an unexpected role for B-type lamins in preserving transcriptional output by regulating chromatin proximity to nuclear speckles, key hubs of transcription and RNA processing. Using TSA-Seq mapping and RNA-Seq in lamin-depleted human cells, we show that most differentially expressed genes are located in non-LAD, speckle-associated chromatin domains. Lamin depletion causes euchromatin to relocate away from nuclear speckles, resulting in global transcriptional repression accompanied by alterations in RNA processing and reduced cell viability. In contrast, heterochromatin gains speckle proximity and exhibits aberrant transcriptional activation. Integrative epigenomic analyses reveal that these spatial chromatin rearrangements precede disruption of speckle-associated domains (SPADs), including genes involved in cell viability and RNA metabolism. Together, our findings uncover a speckle-centered regulatory axis governed by B-type lamins and highlight chromatin-speckle proximity as a key spatial parameter in nuclear gene regulation.

Indexed as

ChromatinLamin Type BTranscription, GeneticCell NucleusCell SurvivalEuchromatinGene Expression RegulationHeterochromatinHomeostasisHumansChromatinEuchromatinHeterochromatinLamin Type B

Identifiers

PMID41909953
PMCPMC13034045

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.