Evidence map›Paper›PMID 41904175›Full record

ArticleScientific data2026

Haplotype-resolved genome sequences of a springtail species, Folsomia candida (Collembola: Isotomidae).

Zhihong Zhan, Hao Yang, Jianfeng Jin, Feng Zhang

Abstract readDataset
In one paragraph

Article in Scientific data, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Zhihong ZhanDepartment of Entomology, College of Plant Protection, Nanjing Agricultural University, Nanjing, 210095, China.
Hao YangDepartment of Entomology, College of Plant Protection, Nanjing Agricultural University, Nanjing, 210095, China.
Jianfeng JinCollege of Life Science, Xinyang Normal University, Xinyang, 464000, China.ORCID http://orcid.org/0000-0001-6875-654X
Feng ZhangDepartment of Entomology, College of Plant Protection, Nanjing Agricultural University, Nanjing, 210095, China. fzhang@njau.edu.cn.ORCID http://orcid.org/0000-0002-1371-266X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Folsomia candida (Collembola: Isotomidae) is one of the most important indicator species for soil animal studies and is widely distributed worldwide. Here, we utilized PacBio HiFi long reads, Oxford Nanopore Technologies (ONT) ultralong reads, Hi-C, Illumina short reads, and ONT long-read transcriptome sequencing to assemble and annotate the genome of Folsomia candida. Two gapless, telomere-to-telomere, haplotype-resolved genomes (HapA and HapB) were successfully assembled, with genome sizes of 228.62 and 228.45 Mb, respectively. The scaffold N50 sizes are 41.45 Mb for both haplotypes. We manually curated and annotated each gene on HapA, providing comprehensive annotation information for this haplotype. Gene annotation revealed a total of 26,329 protein-coding genes in HapA and 26,768 in HapB. These haplotype-resolved Folsomia candida genomes provide a high-quality genomic resource that enables future studies on soil arthropods and springtail genomics.

Indexed as

ArthropodsHaplotypesAnimalsMolecular Sequence Annotation

Identifiers

PMID41904175
PMCPMC13194869

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.