Evidence map›Paper›PMID 41904138›Full record

ArticleNature communications2026

Dbf4-dependent kinase finetunes Ino80 function at chromosome replication origins.

Priyanka Bansal, Shibojyoti Lahiri, Chandni Natalia Kumar, Jessica Furtmeier, Lorenz Spechtenhauser, Lorenzo Galanti, Juan de Dios Barba Tena, Erika Chacin, Garp Linder, María Ángeles Ortíz-Bazán and 11 more

Abstract read
In one paragraph

Article in Nature communications, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors.

Priyanka Bansal *Biomedical Center Munich (BMC), Division of Molecular Biology, Faculty of Medicine, Ludwig-Maximilians-Universität München, Munich, Martinsried, Germany.
Shibojyoti Lahiri *Biomedical Center Munich (BMC), Division of Molecular Biology, Faculty of Medicine, Ludwig-Maximilians-Universität München, Munich, Martinsried, Germany.
Chandni Natalia KumarBiomedical Center Munich (BMC), Division of Molecular Biology, Faculty of Medicine, Ludwig-Maximilians-Universität München, Munich, Martinsried, Germany.ORCID http://orcid.org/0000-0002-7872-9251
Jessica FurtmeierBiomedical Center Munich (BMC), Division of Molecular Biology, Faculty of Medicine, Ludwig-Maximilians-Universität München, Munich, Martinsried, Germany.ORCID http://orcid.org/0000-0003-4639-3252
Lorenz SpechtenhauserBiomedical Center Munich (BMC), Division of Molecular Biology, Faculty of Medicine, Ludwig-Maximilians-Universität München, Munich, Martinsried, Germany.
Lorenzo GalantiCell Biology, Dortmund Life Science Center (DOLCE), TU Dortmund University, Department of Chemistry and Chemical Biology, Dortmund, Germany.
Juan de Dios Barba TenaCell Biology, Dortmund Life Science Center (DOLCE), TU Dortmund University, Department of Chemistry and Chemical Biology, Dortmund, Germany.ORCID http://orcid.org/0000-0002-3562-8071
Erika ChacinBiomedical Center Munich (BMC), Division of Molecular Biology, Faculty of Medicine, Ludwig-Maximilians-Universität München, Munich, Martinsried, Germany.
Garp LinderGene Center and Department of Biochemistry, Ludwig-Maximilians-Universität München, Munich, Martinsried, Germany.
María Ángeles Ortíz-BazánCentro Andaluz de Biología Molecular y Medicina Regenerativa-CABIMER, Universidad de Sevilla-CSIC, Seville, Spain.
Marisa MüllerBiomedical Center Munich (BMC), Division of Molecular Biology, Faculty of Medicine, Ludwig-Maximilians-Universität München, Munich, Martinsried, Germany.
Petra VizjakInstitute of Physiological Chemistry, Faculty of Medicine Carl Gustav Carus, Technische Universität Dresden, Dresden, Germany.ORCID http://orcid.org/0009-0009-4528-6499
Tobias StraubBiomedical Center Munich (BMC), Division of Molecular Biology, Faculty of Medicine, Ludwig-Maximilians-Universität München, Munich, Martinsried, Germany.ORCID http://orcid.org/0000-0002-0547-0453
Felix Mueller-PlanitzInstitute of Physiological Chemistry, Faculty of Medicine Carl Gustav Carus, Technische Universität Dresden, Dresden, Germany.ORCID http://orcid.org/0000-0001-8273-6473
Johannes StiglerGene Center and Department of Biochemistry, Ludwig-Maximilians-Universität München, Munich, Martinsried, Germany.ORCID http://orcid.org/0000-0003-2472-5332
Andrés AguileraCentro Andaluz de Biología Molecular y Medicina Regenerativa-CABIMER, Universidad de Sevilla-CSIC, Seville, Spain.ORCID http://orcid.org/0000-0003-4782-1714
Belen Gómez-GonzálezCentro Andaluz de Biología Molecular y Medicina Regenerativa-CABIMER, Universidad de Sevilla-CSIC, Seville, Spain.ORCID http://orcid.org/0000-0003-1655-8407
Boris PfanderCell Biology, Dortmund Life Science Center (DOLCE), TU Dortmund University, Department of Chemistry and Chemical Biology, Dortmund, Germany.ORCID http://orcid.org/0000-0003-2180-5054
Philipp KorberBiomedical Center Munich (BMC), Division of Molecular Biology, Faculty of Medicine, Ludwig-Maximilians-Universität München, Munich, Martinsried, Germany.ORCID http://orcid.org/0000-0001-7526-6549
Axel ImhofBiomedical Center Munich (BMC), Division of Molecular Biology, Faculty of Medicine, Ludwig-Maximilians-Universität München, Munich, Martinsried, Germany. Imhof@lmu.de.ORCID http://orcid.org/0000-0003-2993-8249
Christoph F KuratBiomedical Center Munich (BMC), Division of Molecular Biology, Faculty of Medicine, Ludwig-Maximilians-Universität München, Munich, Martinsried, Germany. Christoph.kurat@bmc.med.lmu.de.ORCID http://orcid.org/0000-0003-0962-3258

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The highly conserved Dbf4-Dependent Kinase (DDK) plays a pivotal role during S phase. It phosphorylates the replicative helicase (minichromosome maintenance, MCM complex), which leads to the initiation of replication. However, few other targets, besides the MCM complex, are known, leaving DDK an understudied kinase. Here, we determine the nuclear DDK-dependent phosphoproteome by a two-pronged mass spectrometry approach. Among ~ 400 DDK-dependent phosphorylation targets, we find the Arp8 subunit of the INO80 chromatin remodeling complex. Arp8 phosphorylation stabilises INO80's complex integrity, finetunes its nucleosome spacing at replication origins, stimulates replication and improves the replication stress response. Taken together, we report the regulation of a chromatin remodeler with nucleosome-spacing activity by the cell-cycle machinery. DDK not only regulates the core replication machinery but also regulates a factor that generates replication-conducive chromatin architecture at replication origins.

Indexed as

Cell Cycle ProteinsProtein Serine-Threonine KinasesReplication OriginSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsChromatinChromatin Assembly and DisassemblyDNA ReplicationNucleosomesPhosphorylationCDC7 protein, S cerevisiaeCell Cycle ProteinsChromatinINO80 complex, S cerevisiaeNucleosomesProtein Serine-Threonine KinasesSaccharomyces cerevisiae Proteins

Identifiers

PMID41904138
PMCPMC13035910

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.