Evidence map›Paper›PMID 41903143›Full record

ArticleSTAR protocols2026

Protocol to explore olfactory placode morphogenesis using an agent-based model.

Vincent Demont, Gaëlle Letort, David Sanchez, Julie Batut

Abstract read
In one paragraph

Article in STAR protocols, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Vincent DemontUnité de Biologie Moléculaire, Cellulaire et du Développement (MCD, UMR5077), Centre de Biologie Intégrative (CBI, FR 3743), Université de Toulouse, CNRS, UPS, Toulouse 31062, France.
Gaëlle LetortInstitut Pasteur, Université de Paris, CNRS UMR3738, Department of Developmental and Stem Cell Biology, Paris 75015, France. Electronic address: gaelle.letort@pasteur.fr.
David SanchezUnité de Biologie Moléculaire, Cellulaire et du Développement (MCD, UMR5077), Centre de Biologie Intégrative (CBI, FR 3743), Université de Toulouse, CNRS, UPS, Toulouse 31062, France; Institut de Mathématiques de Toulouse, UMR5219, Université de Toulouse, CNRS INSA, Toulouse 31077, France.
Julie BatutUnité de Biologie Moléculaire, Cellulaire et du Développement (MCD, UMR5077), Centre de Biologie Intégrative (CBI, FR 3743), Université de Toulouse, CNRS, UPS, Toulouse 31062, France. Electronic address: julie.batut@utoulouse.fr.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mathematical modeling is a potent tool for determining and assessing reasonable developmental hypotheses. Here, we present a protocol to investigate how variations in chemotactic source distribution influence the formation of bilateral olfactory cell rosettes during zebrafish development. We describe steps for setting up parameters and modifying and testing the different chemotaxis forces. We provide instructions to install and run the code and visualize the results from the GitHub repository. For complete details on the use and execution of this protocol, please refer to Zilliox et al.

Indexed as

Ectodermal PlacodesModels, BiologicalMorphogenesisAnimalsChemotaxisZebrafishComputer sciencesDevelopmental biologyModel Organisms

Identifiers

PMID41903143
PMCPMC13058957

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.