Evidence map›Paper›PMID 41898401›Full record

ArticleInternational journal of molecular sciences2026

A Comparative Study for the Incorporation of 8-oxo-dATP in DNA by Human DNA Polymerases.

Alexander A Kruchinin, Polina N Kamzeeva, Mikhail S Baranov, Yana G Belova, Elizaveta O Boldinova, Andrey G Baranovskiy, Tahir H Tahirov, Andrey V Aralov, Alena V Makarova

Abstract readComparative Study
In one paragraph

Article in International journal of molecular sciences, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

9 authors.

Alexander A KruchininInstitute of Gene Biology, Russian Academy of Sciences, 34/5 Vavilova St., 119334 Moscow, Russia.ORCID 0000-0002-4332-3980
Polina N KamzeevaInstitute of Gene Biology, Russian Academy of Sciences, 34/5 Vavilova St., 119334 Moscow, Russia.
Mikhail S BaranovShemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Miklukho-Maklaya 16/10, 117997 Moscow, Russia.ORCID 0000-0002-9339-7603
Yana G BelovaNational Research Center "Kurchatov Institute", Kurchatov sq. 1, 123182 Moscow, Russia.
Elizaveta O BoldinovaInstitute of Gene Biology, Russian Academy of Sciences, 34/5 Vavilova St., 119334 Moscow, Russia.
Andrey G BaranovskiyEppley Institute for Research in Cancer and Allied Diseases, Fred & Pamela Buffett Cancer Center, University of Nebraska Medical Center, Omaha, NE 68198, USA.ORCID 0000-0002-8017-6932
Tahir H TahirovEppley Institute for Research in Cancer and Allied Diseases, Fred & Pamela Buffett Cancer Center, University of Nebraska Medical Center, Omaha, NE 68198, USA.ORCID 0000-0002-1238-0069
Andrey V AralovShemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Miklukho-Maklaya 16/10, 117997 Moscow, Russia.ORCID 0000-0003-3268-2352
Alena V MakarovaInstitute of Gene Biology, Russian Academy of Sciences, 34/5 Vavilova St., 119334 Moscow, Russia.ORCID 0000-0002-6513-892X

Funding

DNA Replication Machines: Structure-function Studies Administrative SupplementR35GM152032 · NIGMS · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI Tahir H Tahirov · 2024 to 2026
$1.7M
NIGMS NIH HHS R35 GM152032Russian Scientific Foundation 23-14-00209
6 · The paper itself

Abstract

In this work, we analyzed the ability to incorporate 8-oxo-dATP by several human DNA polymerases: replicative Pol ε (exo-) from Family B; base excision repair (BER) enzymes Pol β and Pol λ from Family X; and translesion Pol η, Pol ι, and Pol κ from Family Y. We demonstrated that human DNA polymerases differ in their abilities to discriminate against 8-oxo-dATP. Among the tested DNA polymerases, Pol λ exhibited the worst ability to discriminate against 8-oxo-dATP opposite template T on DNA substrates with a protruding single-stranded 5'-end and a double-stranded DNA with a 1 nt gap. Pol β and DNA polymerases of Family Y showed relatively high accuracy. Pol η demonstrated the most effective discrimination against 8-oxo-dATP on templates T and G. Pol ι exclusively incorporated 8-oxo-dATP opposite template G but not T. Unexpectedly, the catalytic subunit of high-fidelity Pol ε (exo-) incorporated 8-oxo-dATP opposite templates T and G with higher efficiency compared with the error-prone polymerases of Family Y and Pol β. While the structures of human polymerases with incoming 8-oxo-dATP are not available, we speculate on a possible mechanism of 8-oxo-dATP discrimination.

Indexed as

Deoxyadenine NucleotidesDNADNA-Directed DNA PolymeraseDNA Polymerase betaDNA RepairExcision RepairHumansSubstrate SpecificityTranslesion DNA SynthesisDeoxyadenine NucleotidesDNADNA-Directed DNA PolymeraseDNA Polymerase beta8-oxo-dATPDNA polymerasemutagenesisreactive oxygen species (ROS)

Identifiers

PMID41898401
PMCPMC13026661

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.