Evidence map›Paper›PMID 41889965›Full record

ArticlebioRxiv : the preprint server for biology2026

Gene Expansion and Regulatory Rewiring Shape Sex-Biased Evolution of the Mouse Submandibular Gland Secretome.

Luane Jandira Bueno Landau, Shikha Jain, Nathan Griffin, Achisha Saikia, Jill M Kramer, Sarah Knox, Stefan Ruhl, Omer Gokcumen

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Luane Jandira Bueno LandauDepartment of Biological Sciences, University at Buffalo, The State University of New York, NY 14260, USA.ORCID 0000-0002-4528-118X
Shikha JainDepartment of Oral Biology, School of Dental Medicine, University at Buffalo, The State University of New York, NY, 14214, USA.ORCID 0000-0001-5299-114X
Nathan GriffinDepartment of Cell & Tissue Biology, University of California, San Francisco, CA, 94143, USA.ORCID 0000-0001-7566-8046
Achisha SaikiaDepartment of Genetics, Genomics and Bioinformatics, Jacobs School of Medicine and Biomedical Sciences, University at Buffalo, The State University of New York, NY 14203, USA.ORCID 0000-0002-6357-4015
Jill M KramerDepartment of Oral Biology, School of Dental Medicine, University at Buffalo, The State University of New York, NY, 14214, USA.ORCID 0000-0001-9828-8556
Sarah KnoxDepartment of Cell & Tissue Biology, University of California, San Francisco, CA, 94143, USA.ORCID 0000-0002-7567-083X
Stefan RuhlDepartment of Oral Biology, School of Dental Medicine, University at Buffalo, The State University of New York, NY, 14214, USA.ORCID 0000-0003-3888-4908
Omer GokcumenDepartment of Biological Sciences, University at Buffalo, The State University of New York, NY 14260, USA.ORCID 0000-0003-4371-679X

Funding

Evolutionary and functional impact of common genomic structural variationsR35GM156519 · NIGMS · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI Omer Gokcumen · 2025 to 2026
$887k
NIGMS NIH HHS R35 GM156519
6 · The paper itself

Abstract

Mammalian saliva plays essential roles in digestion, immunity, and host-microbiome interactions, yet its protein composition varies across species and sexes. The evolutionary mechanisms underlying this molecular diversity remain poorly understood. Here, we compared mouse and human salivary gland secretomes at genomic, transcriptomic, and proteomic levels to understand how saliva composition evolves. We performed RNA-seq analysis of the major mouse salivary glands (parotid, submandibular, and sublingual), liver and pancreas from both sexes, compared them with reanalyzed previously published human salivary gland transcriptomes, and integrated them with proteome data of mouse and human whole saliva. We found that evolution of gene expression in mouse salivary glands is driven by rapid gene turnover and sexual dimorphism. In the submandibular and sublingual glands, respectively, 68% and 73% of expression from genes encoding secreted proteins derives from lineage-specific genes that lack one-to-one human orthologs. Mouse submandibular gland shows striking sexual dimorphism, with 1537 tissue specific sex-biased genes, five times higher than in the liver, a classic model of sex-biased expression. These genes cluster in regions shaped by recent gene duplication, such as the kallikrein gene cluster, a mouse-specific expansion that accounts for ~16.4% of male-biased submandibular expression. Our analyses suggest that this bias arises through regulatory changes that are expanded by gene duplication, including the spread of a testosterone-associated regulatory motif and the expansion of a shared chromatin domain that promotes coordinated gene regulation. Our results reveal how lineage-specific gene duplication and regulatory rewiring drive rapid, sex-specific evolution of the mammalian salivary gland secretome.

Identifiers

PMID41889965
PMCPMC13015293

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.