Evidence map›Paper›PMID 41884606›Full record

ArticleVirus evolution2026

Evolution and viral properties of the SARS-CoV-2 BA.3.2 subvariant.

Zesuliwe Jule, Cornelius Römer, Taskeen Hossen, Victoria Sviridchik, Kajal Reedoy, Yashica Ganga, Siphokazi Silangwe, Laurelle Jackson, Alexander Norman, Farina Karim and 12 more

Abstract read
In one paragraph

Article in Virus evolution, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Editorial: Emergence of Cicada (BA.3.2) SARS-CoV-2 and the Implications for COVID-19 Surveillance and Monitoring.Medical science monitor : international medical journal of experimental and clinical research · 2026
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors.

Zesuliwe JuleAfrica Health Research Institute and University of KwaZulu-Natal, Nelson R. Mandela School of Medicine, 719 Umbilo Road, Durban 4001, KwaZulu-Natal, South Africa.
Cornelius RömerBiozentrum, University of Basel, Spitalstrasse 41, 4053 Basel, Switzerland.
Taskeen HossenAfrica Health Research Institute and University of KwaZulu-Natal, Nelson R. Mandela School of Medicine, 719 Umbilo Road, Durban 4001, KwaZulu-Natal, South Africa.
Victoria SviridchikThe Lautenberg Center for Immunology and Cancer Research, Faculty of Medicine, Hebrew University of Jerusalem, Jerusalem 91120, Israel.
Kajal ReedoyAfrica Health Research Institute and University of KwaZulu-Natal, Nelson R. Mandela School of Medicine, 719 Umbilo Road, Durban 4001, KwaZulu-Natal, South Africa.
Yashica GangaAfrica Health Research Institute and University of KwaZulu-Natal, Nelson R. Mandela School of Medicine, 719 Umbilo Road, Durban 4001, KwaZulu-Natal, South Africa.
Siphokazi SilangweAfrica Health Research Institute and University of KwaZulu-Natal, Nelson R. Mandela School of Medicine, 719 Umbilo Road, Durban 4001, KwaZulu-Natal, South Africa.
Laurelle JacksonAfrica Health Research Institute and University of KwaZulu-Natal, Nelson R. Mandela School of Medicine, 719 Umbilo Road, Durban 4001, KwaZulu-Natal, South Africa.
Alexander NormanDepartment of Biomedical Engineering, Boston University, Boston, MA 02215, USA.
Farina KarimKhalifa University of Science and Technology, P.O. Box 127788, Abu Dhabi, United Arab Emirates.
Dikeledi KekanaCentre for Respiratory Diseases and Meningitis, National Institute for Communicable Diseases, a Division of the National Health Laboratory Service, 1 Modderfontein Road, Johannesburg 2192, Gauteng, South Africa.
Boitshoko MahlanguCentre for Respiratory Diseases and Meningitis, National Institute for Communicable Diseases, a Division of the National Health Laboratory Service, 1 Modderfontein Road, Johannesburg 2192, Gauteng, South Africa.
Anele MnguniCentre for Respiratory Diseases and Meningitis, National Institute for Communicable Diseases, a Division of the National Health Laboratory Service, 1 Modderfontein Road, Johannesburg 2192, Gauteng, South Africa.
Ayanda NzimandeCentre for Respiratory Diseases and Meningitis, National Institute for Communicable Diseases, a Division of the National Health Laboratory Service, 1 Modderfontein Road, Johannesburg 2192, Gauteng, South Africa.
Nadine StockCentre for Respiratory Diseases and Meningitis, National Institute for Communicable Diseases, a Division of the National Health Laboratory Service, 1 Modderfontein Road, Johannesburg 2192, Gauteng, South Africa.
Mallory BernsteinAfrica Health Research Institute and University of KwaZulu-Natal, Nelson R. Mandela School of Medicine, 719 Umbilo Road, Durban 4001, KwaZulu-Natal, South Africa.ORCID https://orcid.org/0000-0001-7498-2391
Bernadett I GosnellDepartment of Infectious Diseases, Nelson R. Mandela School of Clinical Medicine, University of KwaZulu-Natal, Durban 4001, KwaZulu-Natal, South Africa.
Mahomed-Yunus S MoosaDepartment of Infectious Diseases, Nelson R. Mandela School of Clinical Medicine, University of KwaZulu-Natal, Durban 4001, KwaZulu-Natal, South Africa.ORCID https://orcid.org/0000-0001-6191-4023
Nicole WolterCentre for Respiratory Diseases and Meningitis, National Institute for Communicable Diseases, a Division of the National Health Laboratory Service, 1 Modderfontein Road, Johannesburg 2192, Gauteng, South Africa.ORCID https://orcid.org/0000-0002-9526-0133
Khadija KhanAfrica Health Research Institute and University of KwaZulu-Natal, Nelson R. Mandela School of Medicine, 719 Umbilo Road, Durban 4001, KwaZulu-Natal, South Africa.
Richard A NeherBiozentrum, University of Basel, Spitalstrasse 41, 4053 Basel, Switzerland.ORCID https://orcid.org/0000-0003-2525-1407
Alex SigalAfrica Health Research Institute and University of KwaZulu-Natal, Nelson R. Mandela School of Medicine, 719 Umbilo Road, Durban 4001, KwaZulu-Natal, South Africa.ORCID https://orcid.org/0000-0001-8571-2004

Funding

Wellcome Trust
6 · The paper itself

Abstract

The SARS-CoV-2 Omicron subvariant BA.3.2 descends from BA.3. It emerged two years after BA.3 ceased to circulate and differs by 39 spike mutations from BA.3. Similar to BA.2.86, which circulated at low levels before giving rise to JN.1, BA.3.2 shows a low but persistent circulation globally. Here, we characterize the phylogenetic origin, infection in cell culture, and neutralization of BA.3.2 using live virus and blood plasma samples collected in South Africa at different stages of the Covid-19 pandemic. Like the Omicron BA.2.86 subvariant, we find that BA.3.2 likely emerged in Southern Africa. We also find that an 871 bp deletion removed ORF7 and ORF8. In H1299-ACE2 cells, BA.3.2 has lower cytotoxicity measured as plaque area compared to ancestral SARS-CoV-2 but similar to the co-circulating LP.8.1 Omicron subvariant with which it also shares similar replication and infection focus size. BA.3.2 and LP.8.1 exhibit complete escape from neutralization from pre-Omicron collected plasma samples, have low levels of neutralization by plasma collected in 2024, and higher neutralization by plasma collected in 2025, with BA.3.2 showing moderately lower neutralization than LP.8.1. The emergence of long branch subvariants like BA.3.2 without intermediates likely indicates that unmonitored persistent infections continue to drive large evolutionary shifts in this virus.

Indexed as

Omicron BA.3.2phylogenetic originsaltationSARS-CoV-2viral replication

Identifiers

PMID41884606
PMCPMC13011799

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.