Evidence map›Paper›PMID 41883383›Full record

ArticleEnvironment & health (Washington, D.C.)2026

Clinical Human-Derived Pathogen Signatures Captured by SERS and Deep Learning for Environmental Exposure Risk Assessment.

Zhonghua Shen, Linguo Xie, Yuwei Hou, Zeying He, Junjie Liang, Yuchi Jia, Haipeng Zhang, Jingjing Du, Wenjing Liu, Chunyu Liu

Abstract read
In one paragraph

Article in Environment & health (Washington, D.C.), 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Zhonghua ShenDepartment of Urology, Tianjin Institute of Urology, The Second Hospital of Tianjin Medical University, Tianjin 300211, China.
Linguo XieDepartment of Urology, Tianjin Institute of Urology, The Second Hospital of Tianjin Medical University, Tianjin 300211, China.
Yuwei HouDepartment of Radiology, Tianjin Beichen Hospital, Tianjin 300400, China.
Zeying HeKey Laboratory for Environmental Factors Control of Agro-product Quality Safety, Ministry of Agriculture and Rural Affairs, Agro-Environmental Protection Institute, Tianjin 300191, China.
Junjie LiangDepartment of Urology, Tianjin Institute of Urology, The Second Hospital of Tianjin Medical University, Tianjin 300211, China.
Yuchi JiaDepartment of Urology, Tianjin Institute of Urology, The Second Hospital of Tianjin Medical University, Tianjin 300211, China.
Haipeng ZhangDepartment of Urology, Tianjin Institute of Urology, The Second Hospital of Tianjin Medical University, Tianjin 300211, China.
Jingjing DuState Key Laboratory of Environmental Chemistry and Ecotoxicology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China.
Wenjing LiuKey Laboratory for Environmental Factors Control of Agro-product Quality Safety, Ministry of Agriculture and Rural Affairs, Agro-Environmental Protection Institute, Tianjin 300191, China.ORCID https://orcid.org/0000-0002-7559-5606
Chunyu LiuDepartment of Urology, Tianjin Institute of Urology, The Second Hospital of Tianjin Medical University, Tianjin 300211, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Microbial contamination and antibiotic-resistant bacteria (ARB) pose significant threats to environmental ecosystems, particularly in regions lacking adequate sanitation. Urinary pathogens of human origin, frequently detected in contaminated water and surfaces, represent early indicators of ARB-related exposure. However, current exposure assessment approaches rely heavily on standard strains, limiting their effectiveness in real-world scenarios. In this study, a label-free platform was developed by integrating surface-enhanced Raman spectroscopy (SERS) with a convolutional neural network (CNN) for the ARB exposure assessment. A comprehensive spectral database consisting of 368 clinical urinary isolates was established. The CNN achieved the highest classification accuracy (97.6%), surpassing random forest (93.1%) and PCA-SVM (91.2%). Robust performance was further confirmed in wastewater samples (92.2%) and independent urine specimens (90.3%). Importantly, SHAP-based interpretation revealed key discriminatory features in the 724-738 cm

Indexed as

convolutional neural networkenvironmental health managementpathogensurface-enhanced Raman spectroscopyurine

Identifiers

PMID41883383
PMCPMC13010292

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.