Evidence map›Paper›PMID 41882395›Full record

ReviewProgress in molecular and subcellular biology2026

Microbial Metabolism: Primary and Secondary Metabolites.

Nazmiye Ozlem Sanli, Elif Özlem Arslan Aydoğdu

Abstract readReview
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In one paragraph

Review in Progress in molecular and subcellular biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Nazmiye Ozlem SanliIstanbul University, Faculty of Science, Department of Biology, Section of Biotechnology, Vezneciler, Istanbul, Türkiye. nosanli@istanbul.edu.tr.ORCID http://orcid.org/0000-0001-8969-5125
Elif Özlem Arslan AydoğduIstanbul University, Faculty of Science, Department of Biology, Section of Fundamental and Industrial Microbiology, Vezneciler, Istanbul, Türkiye.ORCID http://orcid.org/0000-0003-1294-7376

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Microbial metabolism encompasses the biochemical networks that enable cells to convert nutrients into the energy and biosynthetic precursors necessary for cellular function. Understanding microbial metabolism is crucial for ecology, microbiology, and applications in biotechnology, agriculture, and medicine, as it underpins the biological processes that sustain life in various environments. Microbial metabolic products can be broadly classified as primary or secondary metabolites. Primary metabolites, such as amino acids, carbohydrates, organic acids, and alcohols, are essential for energy generation, biosynthesis, and cellular maintenance, typically accumulating during the exponential growth phase. In contrast, secondary metabolites, including compounds such as antibiotics, toxins, and alkaloids, are predominantly synthesised during the stationary growth phase and are not essential for basic cellular functions. However, they are often involved in ecological interactions and may provide adaptive advantages to the organisms. This distinction emphasises the dual function of microbial metabolism in supporting life and influencing ecological processes. The regulation of microbial metabolite biosynthesis is influenced by nutrient availability, environmental stresses, and intricate genetic networks. Advances in metabolic engineering, synthetic biology, and CRISPR-based technologies have enabled the redirection of central carbon fluxes to enhance the yield of both primary and secondary metabolites. Multi-omics approaches and computational modeling now provide deeper insights into metabolic regulation, pathway optimization, and the discovery of novel bioactive molecules. In conclusion, microbial metabolites are an invaluable resource for biotechnological innovation. While primary metabolites are essential for metabolic physiology, secondary metabolites offer unique bioactivities that have transformed pharmaceutical development, sustainable agriculture and industrial microbiology. Research focusing on uncovering new microbial diversity and optimising biosynthetic pathways is expected to continue providing insights that could deliver sustainable strategies and innovative solutions to urgent global challenges such as food security, healthcare, and environmental restoration.

Indexed as

BacteriaSecondary MetabolismMetabolic EngineeringMetabolic Networks and PathwaysBioactive compound sourcesBiotechnologyIndustrial microbiologyPrimary metabolitesSecondary metabolites

Identifiers

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.