Evidence map›Paper›PMID 41877004›Full record

ArticleBMC microbiology2026

Genomic characteristics and drug resistance phenotype of Levyella massiliensis isolated from blood.

Tao Gu, Ying Liu, Jian Zhou, Baojian Liu, Xiaoyu Wei, Yong Hu, Yu Wang, Shijun Li

Abstract read
In one paragraph

Article in BMC microbiology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Tao GuKey Laboratory of Microbio and Infectious Disease Prevention and Control in Guizhou Province, Guizhou Center for Disease Control and Prevention, China, Guiyang, Guizhou, 550004, China.
Ying LiuKey Laboratory of Environmental Pollution Monitoring and Disease Control, Ministry of Education, School of Public Health, Guizhou Medical University, Guiyang, Guizhou, 561113, China.
Jian ZhouKey Laboratory of Microbio and Infectious Disease Prevention and Control in Guizhou Province, Guizhou Center for Disease Control and Prevention, China, Guiyang, Guizhou, 550004, China.
Baojian LiuThe First People's Hospital of Guiyang, Guiyang, Guizhou, 550002, China.
Xiaoyu WeiKey Laboratory of Environmental Pollution Monitoring and Disease Control, Ministry of Education, School of Public Health, Guizhou Medical University, Guiyang, Guizhou, 561113, China.
Yong HuKey Laboratory of Microbio and Infectious Disease Prevention and Control in Guizhou Province, Guizhou Center for Disease Control and Prevention, China, Guiyang, Guizhou, 550004, China.
Yu WangThe First People's Hospital of Guiyang, Guiyang, Guizhou, 550002, China. wangzhongyuwy@163.com.
Shijun LiKey Laboratory of Microbio and Infectious Disease Prevention and Control in Guizhou Province, Guizhou Center for Disease Control and Prevention, China, Guiyang, Guizhou, 550004, China. zjumedjun@163.com.

Funding

Key Laboratory of Microbiol and Infectious Disease prevention &Control in Guizhou Province Grant No. Qiankehe Platform Talent-ZDSYS[2023]004Project for Public Health Talent Cultivation of China Grant No. Guo Jikong Zong Ren Han [2024]122The local science foundation of Guizhou Province guided by the Central Committee of China Grant No. Qiankehe[2025]024The Seventh Batch of High-level Innovative Talents of Guizhou Province Grant No. Zhu Ke He Tong GCC[2023]030
6 · The paper itself

Abstract

This study reports the first isolation of a strain of Levyella massiliensis (strain HGL1) from human blood samples in China. Currently, the genomic characteristics, antibiotic resistance, and pathogenic potential of this species have not been fully studied. To systematically decipher the phylogenetic position, genomic composition, and potential pathogenicity-related factors of strain HGL1, this study employed a dual-platform sequencing strategy (PacBio Sequel II and Illumina NovaSeq PE150) for whole-genome sequencing of strain HGL1 and assessed its antibiotic susceptibility through antimicrobial susceptibility testing. Phylogenetic analysis revealed that strain HGL1 and L. massiliensis D22-N-7-79 reside within the same evolutionary clade, with an Average Nucleotide Identity (ANI) of 97.88% and a digital DNA-DNA hybridization (dDDH) value of 80%, supporting the classification of strain HGL1 as a member of L. massiliensis. Genomic analysis indicated that the HGL1 genome is 1,682,293 bp in size with a GC content of 48.85%, harboring a total of 1,613 predicted coding genes, 56 potential virulence genes, and 4 antibiotic resistance genes. Antimicrobial susceptibility testing results showed that this bacterium is susceptible to tigecycline, amoxicillin/clavulanic acid, and some β-lactam antibiotics; however, it exhibits resistance to macrolides (e.g., erythromycin, clarithromycin, azithromycin), trimethoprim/sulfamethoxazole, third-generation cephalosporins (ceftriaxone, cefotaxime), quinolones (ciprofloxacin, levofloxacin), and gentamicin. These findings demonstrate that L. massiliensis HGL1 is a bacterium possessing multidrug resistance and potential human pathogenicity. In-depth analysis of its genomic characteristics and resistance phenotype provides a scientific basis for understanding the biology and combating infections caused by this rare pathogen, underscoring the necessity for enhanced surveillance and research on this bacterium in future clinical practice.

Indexed as

ActinomycetaceaeDrug Resistance, BacterialGenome, BacterialAnti-Bacterial AgentsBase CompositionChinaDrug Resistance, Multiple, BacterialGenomicsHumansMicrobial Sensitivity TestsPhenotypePhylogenySequence Analysis, DNAVirulence FactorsWhole Genome SequencingAnti-Bacterial AgentsVirulence FactorsBacteremiaComparative genomicsComplete genome sequenceLevyella massiliensisMultidrug resistance

Identifiers

PMID41877004
PMCPMC13137690

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.