Evidence map›Paper›PMID 41864978›Full record

ArticleScientific reports2026

A novel bioenergetic model outlines the metabolism of a deep-sea clam and that of its sulfur-oxidizing symbionts.

Marine Vandenberghe, Gonçalo M Marques, Ann C Andersen, Carole Decker, Karine Olu, Sébastien Duperron, Sylvie M Gaudron

Abstract read
In one paragraph

Article in Scientific reports, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Marine VandenbergheUMR 8187 Laboratoire d'Océanologie et de Géosciences (LOG), Université de Lille, ULCO, CNRS, IRD, Lille, F-59000, France.
Gonçalo M MarquesMarine, Environment & Technology Center (MARETEC), LARSyS, Instituto Superior Técnico, University of Lisboa, Lisbon, Portugal.
Ann C AndersenSorbonne Université, CNRS, Station Biologique de Roscoff, Adaptation et Diversité en Milieu Marin, AD2M, Roscoff, F-29680, France.
Carole DeckerIfremer, Laboratoire Environnement Profond, Centre Bretagne - ZI de la Pointe du Diable - CS 10070, Plouzané, 29280, France.
Karine OluIfremer, Laboratoire Environnement Profond, Centre Bretagne - ZI de la Pointe du Diable - CS 10070, Plouzané, 29280, France.
Sébastien DuperronUMR7245 Molécules de Communication et Adaptation des Microorganismes, Muséum national d'Histoire naturelle, Paris, France.
Sylvie M GaudronUMR 8187 Laboratoire d'Océanologie et de Géosciences (LOG), Université de Lille, ULCO, CNRS, IRD, Lille, F-59000, France. sylvie.gaudron@univ-lille.fr.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

For the first time, two Dynamic Energy Budget (DEB) models were developed for a chemosymbiotic deep-sea vesicomyid clam. A classical DEB model was applied and then an innovative DEB model was developed (named "farming"). The models were parameterized using data on host and symbionts, including original unpublished data. In the farming model the digestion of the sulfur-oxidizing bacterial symbionts for host nutrition was explicitly modeled. Unexpected results were obtained regarding the dynamics of host and symbionts with this model: the host appears to forgo a maximal ingestion for a lower and stable ingestion, revealing a new kind of homeostasis. Moreover, when the clam is adult, most of the oxygen consumed by the chemosynthetic symbiosis was predicted to be by the symbionts. A high host energy maintenance flux was predicted and consistent with the likely high energy demand of host ion homeostasis mechanisms to cope with symbiont protons and sulfates release.

Indexed as

BivalviaEnergy MetabolismModels, BiologicalSulfurSymbiosisAnimalsBacteriaOxidation-ReductionSulfur

Identifiers

PMID41864978
PMCPMC13144526

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.