Evidence map›Paper›PMID 41854021›Full record

ArticleBiochemistry2026

Human Endonuclease G Preferentially Cleaves Oxidatively Damaged DNA.

Wen-Ting Lu, Yi-Ping Chen, Wei-Zen Yang, Hanna S Yuan, Jason L J Lin

Abstract read
In one paragraph

Article in Biochemistry, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Wen-Ting LuInstitute of Molecular Biology, Academia Sinica, Taipei 11529, Taiwan.
Yi-Ping ChenInstitute of Molecular Biology, Academia Sinica, Taipei 11529, Taiwan.
Wei-Zen YangInstitute of Molecular Biology, Academia Sinica, Taipei 11529, Taiwan.
Hanna S YuanInstitute of Molecular Biology, Academia Sinica, Taipei 11529, Taiwan.ORCID 0000-0001-9671-6967
Jason L J LinInstitute of Molecular Biology, Academia Sinica, Taipei 11529, Taiwan.ORCID 0000-0003-4526-6059

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Endonuclease G (EndoG) is a conserved endonuclease implicated in mitochondrial DNA (mtDNA) replication, maintenance of mtDNA integrity under oxidative stress, and the removal of nuclear and paternal mtDNA during apoptosis and early embryogenesis. Despite its biological significance, the substrates targeted by EndoG and its cleavage preferences remain unclear. Here, we characterize human EndoG (hEndoG) across diverse nucleic acid substrates, including single-stranded DNA (ssDNA), double-stranded DNA (dsDNA), nicked and gapped dsDNA, modified dsDNA containing 8-oxoguanine (oxoG-DNA) and hydroxymethylated cytosine (5hmC-DNA), single-stranded RNA (ssRNA), and RNA/DNA hybrids. We show that hEndoG binds most of these substrates with only modest differences in affinity (∼10-fold), yet displays a particularly strong preference for cleaving oxidatively damaged DNA, including nicked and gapped dsDNA, and oxoG-DNA. Notably, hEndoG preferentially cleaves the strand opposite the gapped or nicked site, and it targets the complementary strand to the modified base in oxoG-DNA and 5hmC-DNA. Our structural modeling of hEndoG bound to ssDNA and dsDNA indicates that ssDNA is a favored substrate because its flexibility allows kinked conformations that position the scissile phosphate near the catalytic Mg

Indexed as

DNADNA DamageEndodeoxyribonucleasesOxidative StressDNA, Single-StrandedHumansModels, MolecularOxidation-ReductionSubstrate SpecificityDNADNA, Single-StrandedEndodeoxyribonucleasesendonuclease G

Identifiers

PMID41854021
PMCPMC13151035

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.