Evidence map›Paper›PMID 41853339›Full record

ArticleFrontiers in microbiomes2023

Taxonomic composition and carbohydrate-active enzyme content in microbial enrichments from pulp mill anaerobic granules after cultivation on lignocellulosic substrates.

Mabel T Wong, Camilla L Nesbø, Weijun Wang, Marie Couturier, Vincent Lombard, Pascal Lapebie, Nicolas Terrapon, Bernard Henrissat, Elizabeth A Edwards, Emma R Master

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Frontiers in microbiomes, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. High qualityISME communications · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Mabel T WongDepartment of Chemical Engineering and Applied Chemistry, University of Toronto, Toronto, ON, Canada.
Camilla L NesbøDepartment of Chemical Engineering and Applied Chemistry, University of Toronto, Toronto, ON, Canada.
Weijun WangDepartment of Chemical Engineering and Applied Chemistry, University of Toronto, Toronto, ON, Canada.
Marie CouturierUniversité Grenoble Alpes, Centre National de la Recherche Scientifique (CNRS), Centre de Recherches sur les Macromolécules Végétales (CERMAV), Grenoble, France.
Vincent LombardAix-Marseille Université, Centre National de la Recherche Scientifique (CNRS), UMR7257, Laboratoire Architecture et Fonction des Macromolécules Biologiques (AFMB), Marseille, France.
Pascal LapebieAix-Marseille Université, Centre National de la Recherche Scientifique (CNRS), UMR7257, Laboratoire Architecture et Fonction des Macromolécules Biologiques (AFMB), Marseille, France.
Nicolas TerraponAix-Marseille Université, Centre National de la Recherche Scientifique (CNRS), UMR7257, Laboratoire Architecture et Fonction des Macromolécules Biologiques (AFMB), Marseille, France.
Bernard HenrissatAix-Marseille Université, Centre National de la Recherche Scientifique (CNRS), UMR7257, Laboratoire Architecture et Fonction des Macromolécules Biologiques (AFMB), Marseille, France.
Elizabeth A EdwardsDepartment of Chemical Engineering and Applied Chemistry, University of Toronto, Toronto, ON, Canada.
Emma R MasterDepartment of Chemical Engineering and Applied Chemistry, University of Toronto, Toronto, ON, Canada.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Metagenomes of lignocellulose-degrading microbial communities are reservoirs of carbohydrate-active enzymes relevant to biomass processing. Whereas several metagenomes of natural digestive systems have been sequenced, the current study analyses metagenomes originating from an industrial anaerobic digester that processes effluent from a cellulose pulp mill. Both 16S ribosomal DNA and metagenome sequences were obtained following anaerobic cultivation of the digester inoculum on cellulose and pretreated (steam exploded) poplar wood chips. The community composition and profile of predicted carbohydrate-active enzymes were then analyzed in detail. Recognized lignocellulose degraders were abundant in the resulting cultures, including populations belonging to Clostridiales and Bacteroidales orders. Poorly defined taxonomic lineages previously identified in other lignocellulose-degrading communities were also detected, including the uncultivated Firmicutes lineage

Indexed as

anaerobebioconversioncarbohydrate active enzymeslignocellulosemetagenomics

Identifiers

PMID41853339
PMCPMC12993600

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.