Evidence map›Paper›PMID 41846996›Full record

ArticlebioRxiv : the preprint server for biology2026

Expanded stoichiometric model of chondrocyte metabolism: response to cyclical shear and compressive loading.

Aubrey H Kimmel, Adrienne D Arnold, Ayten E Erdogan, Ronak Kommineni, Erik P Myers, Breschine Cummins, Ross P Carlson, Ronald K June

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors.

Aubrey H KimmelDepartment of Mathematical Sciences, Montana State University.
Adrienne D ArnoldDepartment of Microbiology & Cell Biology, Center for Biofilm Engineering, Montana State University.
Ayten E ErdoganDepartment of Chemical & Biological Engineering, Center for Biofilm Engineering, Montana State University.
Ronak KommineniDepartment of Mathematical Sciences, Montana State University.
Erik P MyersDepartment of Mechanical & Industrial Engineering, Montana State University.
Breschine CumminsDepartment of Mathematical Sciences, Montana State University.ORCID 0000-0002-3097-5277
Ross P CarlsonDepartment of Chemical & Biological Engineering, Center for Biofilm Engineering, Montana State University.
Ronald K JuneDepartment of Mechanical & Industrial Engineering, Montana State University.ORCID 0000-0003-0752-4109

Funding

Role of Glucose metabolism in Chondrocyte MechanotransductionR01AR073964 · NIAMS · MONTANA STATE UNIVERSITY - BOZEMAN · PI JUNE, RONALD KENT · 2019 to 2024
$2.4M
Metabolomic Profiling to Identify Candidate Biomarker Profiles and Molecular Endotypes for OsteoarthritisR01AR081489 · NIAMS · MONTANA STATE UNIVERSITY - BOZEMAN · PI Ronald Kent June · 2023 to 2026
$1.8M
NIAMS NIH HHS R01 AR073964NIAMS NIH HHS R01 AR081489
6 · The paper itself

Abstract

Cartilage deterioration is a hallmark osteoarthritis, and there is substantial interest in developing strategies for cartilage repair. Cyclical mechanical stimulation has been known for decades to drive synthesis of cartilage matrix proteins. Matrix synthesis requires activation of central metabolism for producing precursors to non-essential amino acids required for protein translation. However, there are gaps in knowledge regarding how mechanical stimuli affect chondrocyte central metabolism. Here, we find that cyclical shear and compression drive differences in chondrocyte central metabolism in a sex-dependent manner. Based on established biochemistry, we developed and tested a stoichiometric model containing 139 metabolites and 172 reactions from central metabolism that includes production of key cartilage matrix proteins. We then used experimental metabolomics data from shear and compressive stimulation of osteoarthritic chondrocytes to constrain this model and ran multiple simulations examining the potential for producing matrix proteins and ATP. Our results show that both shear and compression can stimulate osteoarthritic chondrocyte metabolism in a manner consistent with production of cartilage matrix proteins, with notable differences between male and female chondrocytes. Additionally, and importantly, our simulation results suggest that nitrogen availability is a key limitation to chondrocyte synthesis of matrix proteins. These results are a starting point for using central metabolism of chondrocytes to optimize synthesis of matrix proteins for cartilage repair. For example, increasing glutamine levels in the presence of cyclical compression has potential to increase production of both types II and VI collagen. These strategies have potential for improving cartilage tissue engineering and repair.

Indexed as

chondrocyte biologyflux balance analysismechanotransductionmetabolic fluxosteoarthritisstoichiometric modelingsystems biology

Identifiers

PMID41846996
PMCPMC12991157

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.