Evidence map›Paper›PMID 41845200›Full record

ArticleBMC microbiology2026

A novel actinomycete, Streptomyces fugnipugnans sp. nov., with potent antifungal activity against Colletotrichum orbiculare.

Chuang Han, Jia-Xin Song, Yu-Han Guo, Xin-Ying He, Xian-Cheng Zhang, Xiao-Dong Dai, Jun-Wei Zhao, Xiang-Jing Wang

Abstract read
In one paragraph

Article in BMC microbiology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Analysis of the Subculture Effect on theJournal of fungi (Basel, Switzerland) · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Chuang HanKey Laboratory of Agricultural Microbiology of Heilongjiang Province, Northeast Agricultural University, No. 59 Mucai Street, Xiangfang District, Harbin, 150030, P. R. China.
Jia-Xin SongKey Laboratory of Agricultural Microbiology of Heilongjiang Province, Northeast Agricultural University, No. 59 Mucai Street, Xiangfang District, Harbin, 150030, P. R. China.
Yu-Han GuoKey Laboratory of Agricultural Microbiology of Heilongjiang Province, Northeast Agricultural University, No. 59 Mucai Street, Xiangfang District, Harbin, 150030, P. R. China.
Xin-Ying HeKey Laboratory of Agricultural Microbiology of Heilongjiang Province, Northeast Agricultural University, No. 59 Mucai Street, Xiangfang District, Harbin, 150030, P. R. China.
Xian-Cheng ZhangNational Collection of Edible Fungi (Heilongjiang), Institute of Microbiology, Heilongjiang Academy of Sciences, No. 68 Zhaolini Street, Daoli District, Harbin, 150010, P.R. China.
Xiao-Dong DaiNational Collection of Edible Fungi (Heilongjiang), Institute of Microbiology, Heilongjiang Academy of Sciences, No. 68 Zhaolini Street, Daoli District, Harbin, 150010, P.R. China.
Jun-Wei ZhaoKey Laboratory of Agricultural Microbiology of Heilongjiang Province, Northeast Agricultural University, No. 59 Mucai Street, Xiangfang District, Harbin, 150030, P. R. China. guyan2080@126.com.
Xiang-Jing WangKey Laboratory of Agricultural Microbiology of Heilongjiang Province, Northeast Agricultural University, No. 59 Mucai Street, Xiangfang District, Harbin, 150030, P. R. China. wangneau2013@163.com.

Funding

scientific research business expenses of provincial research institutes of Heilongjiang Province CZBZ202506003
6 · The paper itself

Abstract

backgroundCucumber anthracnose, which is caused by Colletotrichum orbiculare, significantly threatens the quality and production of crops. Chemical fungicides are frequently used to manage this disease, but increasing health and environmental concerns have highlighted the urgent need to develop sustainable biocontrol strategies.

resultsActinomycetes were isolated from pine tree rhizosphere soil, and the NEAU-S77ᵀ strain was identified as a potent antagonist against C. orbiculare. Morphological, physiological, and biochemical analyses confirmed NEAU-S77ᵀ as a novel species, designated Streptomyces fugnipugnans sp. nov. Pot experiments showed that its spore suspension (1.0 × 10⁸ CFU/mL) significantly reduced the disease index of cucumber anthracnose from 57.3% to 14.1%, achieving a control efficiency of 80.3%. Fermentation optimization with cottonseed meal medium yielded a fermented supernatant with a pathogen inhibition rate of 71.9%. Whole-genome sequencing revealed a 10,269,260 bp genome (G + C content: 71.54%) encoding 8,495 genes. Functional annotation identified 390 genes related to secondary metabolite biosynthesis and 354 genes associated with antibiotic production. AntiSMASH analysis predicted 66 secondary metabolite biosynthetic gene clusters (BGCs), and comparison with the MIBiG database confirmed clusters encoding known antifungal compounds (e.g., 9-methylstreptimidone, mediomycin A, anisomycin, nigericin, bafilomycin B1).

conclusionsThe novel strain S. fugnipugnans NEAU-S77ᵀ, isolated from pine rhizosphere soil, exhibits excellent biocontrol potential against C. orbiculare. Its high control efficiency, optimized fermentation performance in cottonseed meal medium, and rich repertoire of secondary metabolite BGCs (including those encoding known antifungal substances) highlight its prominent biocontrol activity and promising application in plant disease management.

Indexed as

AntibiosisAntifungal AgentsColletotrichumStreptomycesCucumis sativusDNA, BacterialGenome, BacterialPhylogenyPinusPlant DiseasesRhizosphereRNA, Ribosomal, 16SSequence Analysis, DNASoil MicrobiologyAntifungal AgentsDNA, BacterialRNA, Ribosomal, 16SActinomyceteAntifungalColletotrichum orbiculareStreptomyces

Identifiers

PMID41845200
PMCPMC13107716

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.