Evidence map›Paper›PMID 41844011›Full record

ArticleThe journal of prevention of Alzheimer's disease2026

Integrative SMR prioritizes oxidative stress-related regulatory genes for Alzheimer's disease with brain-tissue validation.

Liu Wu, Yu-Ting Dong, Xin Mu, Xiao Luo, Ze-Jun Chen

Abstract read
In one paragraph

Article in The journal of prevention of Alzheimer's disease, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

5 authors.

Liu WuChengdu Integrated TCM & Western Medicine Hospital, Chengdu University of Traditional Chinese Medicine, Chengdu, Sichuan, China.
Yu-Ting DongSchool of Acupuncture and Tuina, Chengdu University of Traditional Chinese Medicine, Chengdu, Sichuan, China.
Xin MuDepartment of Neurology, Chengdu Integrated TCM& Western Medicine Hospital, Chengdu University of Traditional Chinese Medicine, Chengdu, Sichuan, China.
Xiao LuoDepartment of Neurology, Chengdu Integrated TCM& Western Medicine Hospital, Chengdu University of Traditional Chinese Medicine, Chengdu, Sichuan, China.
Ze-Jun ChenDepartment of Nephrology, Chengdu Integrated TCM& Western Medicine Hospital, Chengdu University of Traditional Chinese Medicine, Chengdu, Sichuan, China. Electronic address: chengduhospital@163.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Oxidative stress (OS) plays a critical role in the pathogenesis of Alzheimer's disease (AD), yet its genetic and epigenetic regulatory mechanisms remain unclear. In this study, we applied a three-step summary-based Mendelian randomization (SMR) framework to integrate Alzheimer's disease (AD) GWAS summary statistics with peripheral-blood eQTL and mQTL datasets, and further evaluated brain-tissue relevance using GTEx v8 and AMP-AD resources. Across the three-step SMR analyses, we prioritized multiple OS-related candidate genes (e.g., CRLS1, PRKAA1, CYP2E1, GPX1, and APP) associated with AD risk, and brain-tissue analyses further highlighted KEAP1, SIRT1, and PRDX5 as region-relevant signals. Functional enrichment analyses highlighted critical pathways such as "Nrf2-mediated antioxidant response" and "PI3K-AKT signaling," emphasizing the roles of oxidative stress, mitochondrial function, and neuroinflammation in AD. Novel regulatory mechanisms were uncovered at methylation sites (e.g., cg20211653 associated with ABCA1), linking epigenetic regulation to transcriptional mechanisms and providing candidates for brain-tissue follow-up. This study provides new insights into the molecular underpinnings of AD, bridging genetic variation, epigenetic regulation, and transcription, and identifies potential therapeutic targets for mitigating oxidative damage and neurodegeneration.

Indexed as

Alzheimer DiseaseBrainOxidative StressEpigenesis, GeneticGenetic Predisposition to DiseaseGenome-Wide Association StudyHumansQuantitative Trait LociAlzheimer’s diseaseEnrichment analysiseQTLmQTLoxidative stressProtein-protein interaction networkSMR

Identifiers

PMID41844011
PMCPMC13014940

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.