Evidence map›Paper›PMID 41839691›Full record

ArticleJournal, genetic engineering & biotechnology2026

Uncovering evolutionary and phylogenetic relationships in Glyptothorax species through comparative mitochondrial genomics.

Somasundaram Iyyappan, Suvadip Ghara, Irfan Ahmad Bhat, Irfan Ahmad Khan, Mohd Ashraf Rather

Abstract read
In one paragraph

Article in Journal, genetic engineering & biotechnology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Phylogeny and Selection Pressure of GenusAnimals : an open access journal from MDPI · 2026
    Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Somasundaram IyyappanDivision of Fish Genetics and Biotechnology, Faculty of Fisheries Ganderbal, Sher-e- Kashmir University of Agricultural Science and Technology, Kashmir 190006, India.
Suvadip GharaDivision of Fish Genetics and Biotechnology, Faculty of Fisheries Ganderbal, Sher-e- Kashmir University of Agricultural Science and Technology, Kashmir 190006, India.
Irfan Ahmad BhatDivision of Fish Genetics and Biotechnology, Faculty of Fisheries Ganderbal, Sher-e- Kashmir University of Agricultural Science and Technology, Kashmir 190006, India.
Irfan Ahmad KhanDivision of Fish Genetics and Biotechnology, Faculty of Fisheries Ganderbal, Sher-e- Kashmir University of Agricultural Science and Technology, Kashmir 190006, India.
Mohd Ashraf RatherDivision of Fish Genetics and Biotechnology, Faculty of Fisheries Ganderbal, Sher-e- Kashmir University of Agricultural Science and Technology, Kashmir 190006, India. Electronic address: biotechashraf786@gmail.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The mitochondrial genome serves as a crucial molecular marker for studying phylogenetic relationships and molecular evolution in fish. Despite their ecological significance in freshwater ecosystems, Glyptothorax fishes have limited evolutionary research, with only a few complete mitochondrial genomes reported. The present study examines the complete mitochondrial DNA (mtDNA) of Glyptothorax cavia, G. trilineatus, G. annandalei, G. sinensis, and G. granosus, with sequence lengths of 16,529 base pairs (bp), 16,539 bp, 16,541 bp, 16,531 bp, and 16,540 bp, respectively. Our comprehensive analysis reveals that most protein-coding genes (PCGs) begin with the ATG codon and terminate with the TAA stop codon, although some exhibit incomplete stop codons (T/TA). The majority of the 13 protein-coding genes (PCGs) display a negative guanine-cytosine (GC) skew, except for the (Skew value: 0.53-0.60) NADH dehydrogenase subunit 6 (ND6) gene. In terms of adenine-thymine (AT) (AT Skew value: 0-0.007), eight PCGs have positive values, while cytochrome c oxidase subunit 1 (COX1-), NADH dehydrogenase subunit 3 (ND3), NADH dehydrogenase subunit 4L (ND4L), NADH dehydrogenase subunit 4 (ND4), NADH dehydrogenase subunit 5 (ND5), and cytochrome b (Cytb) exhibit negative values. Genetic distance and non-synonymous to synonymous substitution ratio (Ka/Ks) analyses indicate purifying selection acting on the 13 PCGs, with selection pressures potentially influenced by environmental adaptations. Phylogenetic and evolutionary analyses identify G. sinensis, G. annandalei, and G. granosus as closely related species.

Indexed as

Comparative genomicsEvolutionGlyptothoraxMitochondrial genomePhylogenetic

Identifiers

PMID41839691
PMCPMC12753221

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.