Evidence map›Paper›PMID 41826876›Full record

SynthesisBMC infectious diseases2026

Systematic review of point-of-need molecular diagnostics for rotavirus and enteric adenoviruses F40/F41.

Fatou Kiné Top, Cheikh Tidiane Diagne, Cheikh Talibouya Touré, Julie-Melissa Gonfouli, Oumar Faye, Yakhya Dieye, Julien Reboud, Abdourahmane Sow, Jonathan M Cooper, Martin Faye

Abstract readSystematic Review
In one paragraph

Synthesis in BMC infectious diseases, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Fatou Kiné TopVirology Department, Institut Pasteur de Dakar, 36 Avenue Pasteur, BP 220, Dakar, Senegal.
Cheikh Tidiane DiagneDiatropix Department, Institut Pasteur de Dakar, 36 Avenue Pasteur, BP 220, Dakar, Senegal.
Cheikh Talibouya TouréVirology Department, Institut Pasteur de Dakar, 36 Avenue Pasteur, BP 220, Dakar, Senegal.
Julie-Melissa GonfouliMicrobiology Department, Institut Pasteur de Dakar, 36 Avenue Pasteur, BP 220, Dakar, Senegal.
Oumar FayeVirology Department, Institut Pasteur de Dakar, 36 Avenue Pasteur, BP 220, Dakar, Senegal.
Yakhya DieyeMicrobiology Department, Institut Pasteur de Dakar, 36 Avenue Pasteur, BP 220, Dakar, Senegal.
Julien ReboudUniversity of Glasgow, Glasgow, Great Britain, Scotland.
Abdourahmane SowPublic Health Department, Institut Pasteur de Dakar, 36 Avenue Pasteur, BP 220, Dakar, Senegal.
Jonathan M CooperUniversity of Glasgow, Glasgow, Great Britain, Scotland.
Martin FayeVirology Department, Institut Pasteur de Dakar, 36 Avenue Pasteur, BP 220, Dakar, Senegal. martin.faye@pasteur.sn.

Funding

European Union Grant No. 101057251Innovate UK Grant No. 10052860
6 · The paper itself

Abstract

backgroundDiarrhea is a leading cause of mortality in children under five, with rotavirus and enteric adenoviruses F40/F41 being significant contributors. In regions like Africa and Southeast Asia, the incidence is exacerbated by poor hygiene and sanitation, as well as the challenges around availability and affordability of healthcare and disease diagnostics. The objective of this systematic review was to identify and evaluate molecular assays for the detection of rotavirus and enteric adenoviruses F40/F41, with particular emphasis on diagnostic performance and suitability for point-of-care use.

methodsA systematic review of literature from 2001 to 2024 was conducted following PRISMA guidelines. Out of 659,613 records screened, a subset of primary studies reporting on molecular assays development or diagnostic performance met the inclusion criteria. Studies exclusively focused on epidemiology, vaccine impact, or narrative reviews were excluded from the analytical synthesis.

resultsThe review identified 26 PCR-based assays and 3 isothermal amplification assays. Reported clinical sensitivities ranged from approximately 85% to 100%, with specificities generally above 95% across studies. Several assays also demonstrated low limits of detection and turnaround times compatible with decentralized use. In particular, three LAMP assays and three PCR-based methods fulfilled key performance and operational criteria for point-of-care diagnostics. The review concluded that molecular diagnostics, especially LAMP assays, are effective for rapid detection of rotavirus and enteric adenoviruses F40/F41.

conclusionWhile PCR assays are considered the gold standard, LAMP assays are more accessible and faster, making them better suited for use in resource-limited settings. These assays show promising performance and may support point-of-care diagnostics.

Indexed as

Adenoviruses, HumanMolecular Diagnostic TechniquesPoint-of-Care SystemsRotavirusRotavirus InfectionsDiarrheaHumansNucleic Acid Amplification TechniquesRapid Diagnostic TestsSensitivity and SpecificityEnteric adenoviruses F40/F41GastroenteritisMolecular diagnosticsPoint-of-careRotavirus

Identifiers

PMID41826876
PMCPMC13097646

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.