Evidence map›Paper›PMID 41823618›Full record

ArticlePlant biotechnology journal2026

A Natural LTR Retrotransposon Insertion in the Promoter of GhNAC140-Dt Boosts Cotton Lint Yield.

Yujia Yu, Xiaoguang Shang, Haitang Wang, Lijie Zhu, Xu Han, Qingfei He, Weixi Li, Yonglin Tan, Guozhong Zhu, Wangzhen Guo

Abstract read
In one paragraph

Article in Plant biotechnology journal, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Genomic diversity and the domestication history of cotton (Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Yujia YuState Key Laboratory of Crop Genetics & Germplasm Enhancement and Utilization, Nanjing Agricultural University, Nanjing, China.
Xiaoguang ShangState Key Laboratory of Crop Genetics & Germplasm Enhancement and Utilization, Nanjing Agricultural University, Nanjing, China.
Haitang WangState Key Laboratory of Crop Genetics & Germplasm Enhancement and Utilization, Nanjing Agricultural University, Nanjing, China.
Lijie ZhuState Key Laboratory of Crop Genetics & Germplasm Enhancement and Utilization, Nanjing Agricultural University, Nanjing, China.
Xu HanState Key Laboratory of Crop Genetics & Germplasm Enhancement and Utilization, Nanjing Agricultural University, Nanjing, China.
Qingfei HeState Key Laboratory of Crop Genetics & Germplasm Enhancement and Utilization, Nanjing Agricultural University, Nanjing, China.
Weixi LiState Key Laboratory of Crop Genetics & Germplasm Enhancement and Utilization, Nanjing Agricultural University, Nanjing, China.
Yonglin TanState Key Laboratory of Crop Genetics & Germplasm Enhancement and Utilization, Nanjing Agricultural University, Nanjing, China.
Guozhong ZhuState Key Laboratory of Crop Genetics & Germplasm Enhancement and Utilization, Nanjing Agricultural University, Nanjing, China.
Wangzhen GuoState Key Laboratory of Crop Genetics & Germplasm Enhancement and Utilization, Nanjing Agricultural University, Nanjing, China.ORCID https://orcid.org/0000-0003-3333-7147

Funding

Biological Breeding-National Science and Technology Major Project 2023ZD04068Collaborative Innovation Center for Modern Crop Production co-sponsored by Province and Ministry 10Hainan Provincial Joint Project of Sanya Yazhou Bay Science and Technology City 2021JJLH0010National Key Research and Development Program of China 2023YFD2301200National Natural Science Foundation of China 32372166
6 · The paper itself

Abstract

Transposable elements (TEs) are fundamental drivers of crop evolution and domestication. Whereas the underlying mechanisms of TE-mediated gene activation remain poorly understood. Lint percentage is an important yield component in cotton. Here, we report a retrotransposon insertion in the promoter of GhNAC140-Dt, a secondary wall NAC encoding gene, to promote the lint production by elevating its expression. We confirm that a 60 bp core cis-regulatory module within the TE's LTR (long terminal repeat) specifically recruits the transcription factor GhMYB46 and increases downstream genes' expression. GhNAC140-Dt overexpression activates the expressions of secondary cell wall development related genes, including GhCESA4-Dt, GhCESA4-At, and GhCOBL9-At, promotes cellulose deposition, and enhances lint percentage. This retrotransposon insertion massively emerges on the domestication transition from Gossypium hirsutum races to cultivated cotton accessions, with > 80% fixation in modern cultivars. This work deepens our understanding of TE-mediated gene activation; it also provides direct molecular evidence for "transposon-driven yield evolution" in crop domestication.

Indexed as

GossypiumPlant ProteinsPromoter Regions, GeneticRetroelementsTerminal Repeat SequencesGene Expression Regulation, PlantPlants, Genetically ModifiedTranscription FactorsPlant ProteinsRetroelementsTranscription FactorsGossypium hirsutumNAC transcription factorsecondary cell wall developmenttransposable elementsyield component

Identifiers

PMID41823618
PMCPMC13205880

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.