Evidence map›Paper›PMID 41822699›Full record

ArticlemedRxiv : the preprint server for health sciences2026

In-home molecular testing of tongue swabs and sputum to inform household-level screening with diagnostic escalation strategies for tuberculosis contact investigation: a prospective cohort study in South Africa.

Andrew Medina-Marino, Sharon Olifant, Maria Pieruccini, Kuhle Fiphaza, Nondumiso Ngcelwane, Morten Ruhwald, Adam Penn-Nicholson, Bernard Fourie

Abstract readPreprint
In one paragraph

Article in medRxiv : the preprint server for health sciences, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors.

Andrew Medina-MarinoDSI-NRF Centre of Excellence for Biomedical Tuberculosis Research, Centre for Tuberculosis Research, Division of Molecular Biology and Human Genetics, Faculty of Medicine and Health Sciences, Stellenbosch University, Cape Town, South Africa.ORCID 0000-0002-2691-982X
Sharon OlifantDepartment of Medical Microbiology, Faculty of Health Sciences, University of Pretoria, Pretoria, South Africa.ORCID 0000-0003-0853-2207
Maria PierucciniSchool of Public Health, Brown University, Providence, Rhode Island, U.S.A.
Kuhle FiphazaResearch Unit, Foundation for Professional Development, East London, South Africa.ORCID 0009-0007-8785-025X
Nondumiso NgcelwaneBuffalo City Metro Health District, Eastern Cape Provincial Department of Health, Bisho, South Africa.
Morten RuhwaldFIND, Geneva, Switzerland.ORCID 0000-0002-1597-441X
Adam Penn-NicholsonFIND, Geneva, Switzerland.ORCID 0000-0002-0095-4141
Bernard FourieDepartment of Medical Microbiology, Faculty of Health Sciences, University of Pretoria, Pretoria, South Africa.ORCID 0000-0002-1630-3554

Funding

Multi-level and Intersectional Stigma and other Social Determinant Effects on TB Case Detection, Care, and Treatment Outcomes: The MISSED TB Outcomes StudyR01AI150485 · NIAID · DESMOND TUTU HIV FOUNDATION · PI KIPP, AARON M, MEDINA-MARINO, ANDREW · 2021 to 2025
$2.8M
NIAID NIH HHS R01 AI150485
6 · The paper itself

Abstract

Background: Household contact investigation for tuberculosis (TB) is limited by referral for clinic-based testing services. We evaluated the performance of in-home tongue swab (TS) testing among symptom-agnostic household contacts (HHC) to inform HCI screening strategies. Methods: We conducted a prospective cohort study among HHC of TB patients in Eastern Cape, South Africa. In-home testing of sputum and TSs, with TSs pooled from up to three HHCs, was performed using Xpert Ultra on portable GeneExpert devices. Outcomes included diagnostic performance of TS testing relative to sputum and linkage-to-care outcomes. Findings: Between June 2021 and October 2024, 909 HHC were enrolled; 99·1% provided s TS, 31·6% provided sputum. Overall sensitivity and specificity of TS testing was 61·9% (95% CI: 38·4%-81·9%) and 100% (98·9%-100%), respectively; sensitivity was 100% (47·8%-100%) for individually tested swabs. Among two-swab and three-swab pools where ≥1 individual was sputum positive, 55·6% (21·2%-86·3%) and 42·9% (9·9%-81·6%) tested positive, respectively; TS sensitivity declined with decreasing sputum Ultra semi-quantitative category. 27 of 439 (6·2%) households had an indictation of secondary TB; 13 (3·0%) by sputum and TS, 11 (2·5%) by sputum only, 3 (0·7%) by TS only. Sputum testing identified 29 HHC with TB (yield=3·2%); 25/29 (86·2%) linked to care (median 1 day [IQR 1-2]). Interpretation: While in-home molecular testing of sputum supported rapid linkage-to-care, and TSs enabled near-universal testing of symptom-agnostic HHCs, efficiency gains through pooled TS testing must be balance against sensitivity trade-offs. Funding: U.S. NIH; Australian Department of Foreign Affairs and Trade; UK Foreign, Commonwealth and Development Office.

Indexed as

Case FindingHousehold Contact InvestigationIn-home TestingSpecimen PoolingTongue SwabTuberculosis

Identifiers

PMID41822699
PMCPMC12978195

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.