Evidence map›Paper›PMID 41820664›Full record

ArticleNature methods2026

Isotonic and minimally invasive optical clearing media for live cell imaging ex vivo and in vivo.

Shigenori Inagaki, Nao Nakagawa-Tamagawa, Nathan Zechen Huynh, Yuki Kambe, Rei Yagasaki, Satoshi Manita, Satoshi Fujimoto, Takahiro Noda, Misato Mori, Aki Teranishi and 11 more

Abstract read
In one paragraph

Article in Nature methods, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Review
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors.

Shigenori InagakiDepartment of Developmental Neurophysiology, Graduate School of Medical Sciences, Kyushu University, Higashi-ku, Fukuoka, Japan. inagaki.shigenori.570@m.kyushu-u.ac.jp.ORCID http://orcid.org/0000-0003-1413-1207
Nao Nakagawa-TamagawaDepartment of Physiology, Graduate School of Medical and Dental Sciences, Kagoshima University, Kagoshima, Japan.ORCID http://orcid.org/0000-0002-8888-9240
Nathan Zechen HuynhDepartment of Pharmacology, Graduate School of Medical and Dental Sciences, Kagoshima University, Kagoshima, Japan.ORCID http://orcid.org/0009-0002-2602-8354
Yuki KambeDepartment of Pharmacology, Graduate School of Medical and Dental Sciences, Kagoshima University, Kagoshima, Japan.ORCID http://orcid.org/0000-0003-1484-0628
Rei YagasakiNano Life Science Institute, Kanazawa University, Kanazawa, Japan.ORCID http://orcid.org/0009-0005-7830-4391
Satoshi ManitaDepartment of Neurophysiology, Faculty of Medicine, University of Yamanashi, Chuo, Japan.ORCID http://orcid.org/0000-0002-4678-0853
Satoshi FujimotoDepartment of Developmental Neurophysiology, Graduate School of Medical Sciences, Kyushu University, Higashi-ku, Fukuoka, Japan.ORCID http://orcid.org/0000-0002-7618-5502
Takahiro NodaDepartment of Developmental Neurophysiology, Graduate School of Medical Sciences, Kyushu University, Higashi-ku, Fukuoka, Japan.
Misato MoriNano Life Science Institute, Kanazawa University, Kanazawa, Japan.
Aki TeranishiNano Life Science Institute, Kanazawa University, Kanazawa, Japan.ORCID http://orcid.org/0009-0005-7209-010X
Hikari TakeshimaDepartment of Developmental Neurophysiology, Graduate School of Medical Sciences, Kyushu University, Higashi-ku, Fukuoka, Japan.
Koki IshikawaDepartment of Developmental Neurophysiology, Graduate School of Medical Sciences, Kyushu University, Higashi-ku, Fukuoka, Japan.
Yuki NaitouDepartment of Stem Cell Biology and Medicine, Graduate School of Medical Sciences, Kyushu University, Higashi-ku, Fukuoka, Japan.
Tatsushi YokoyamaDepartment of Optical Neural and Molecular Physiology, Graduate School of Biostudies, Kyoto University, Kyoto, Japan.ORCID http://orcid.org/0000-0001-7159-9039
Masayuki SakamotoDepartment of Optical Neural and Molecular Physiology, Graduate School of Biostudies, Kyoto University, Kyoto, Japan.ORCID http://orcid.org/0000-0001-6458-113X
Katsuhiko HayashiDepartment of Stem Cell Biology and Medicine, Graduate School of Medical Sciences, Kyushu University, Higashi-ku, Fukuoka, Japan.ORCID http://orcid.org/0000-0001-7359-5939
Kazuo KitamuraDepartment of Neurophysiology, Faculty of Medicine, University of Yamanashi, Chuo, Japan.ORCID http://orcid.org/0000-0002-8956-4122
Yoshiaki TagawaDepartment of Physiology, Graduate School of Medical and Dental Sciences, Kagoshima University, Kagoshima, Japan.
Satoru OkudaNano Life Science Institute, Kanazawa University, Kanazawa, Japan.ORCID http://orcid.org/0000-0003-3792-8067
Tatsuo K SatoFOREST, Japan Science and Technology Agency, Saitama, Japan.
Takeshi ImaiDepartment of Developmental Neurophysiology, Graduate School of Medical Sciences, Kyushu University, Higashi-ku, Fukuoka, Japan. imai.takeshi.457@m.kyushu-u.ac.jp.ORCID http://orcid.org/0000-0002-8449-0080

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Tissue clearing has been widely used for fluorescence imaging of fixed tissues, but its application to live tissues has been limited by toxicity. Here we develop minimally invasive optical clearing media for fluorescence imaging of live mammalian tissues. Light scattering is minimized by adding spherical polymers with low osmolarity to the extracellular medium. A clearing medium containing bovine serum albumin (SeeDB-Live) is compatible with live cells, enabling structural and functional imaging of live tissues, such as spheroids, organoids, acute brain slices and the mouse brains in vivo. SeeDB-Live minimally affects neuronal electrophysiological properties and sensory responses in vivo, and facilitates fluorescence imaging of deep cortical layers in live animals without detectable toxicity to neurons or behavior. We further demonstrate its utility to epifluorescence voltage imaging in acute brain slices and in vivo preparations. Thus, SeeDB-Live expands both the depth and modality range of fluorescence imaging in live mammalian tissues.

Indexed as

Optical ImagingSerum Albumin, BovineAnimalsBrainHumansMiceNeuronsSerum Albumin, Bovine

Identifiers

PMID41820664
PMCPMC13076227

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.